ID A0A194YMJ3_SORBI Unreviewed; 553 AA.
AC A0A194YMJ3;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=Cyclin-like domain-containing protein {ECO:0000259|SMART:SM00385};
GN ORFNames=SORBI_3004G031600 {ECO:0000313|EMBL:KXG29406.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG29406.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG29406.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the cyclin family.
CC {ECO:0000256|RuleBase:RU000383}.
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DR EMBL; CM000763; KXG29406.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A194YMJ3; -.
DR STRING; 4558.A0A194YMJ3; -.
DR EnsemblPlants; KXG29406; KXG29406; SORBI_3004G031600.
DR Gramene; KXG29406; KXG29406; SORBI_3004G031600.
DR InParanoid; A0A194YMJ3; -.
DR OrthoDB; 358353at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR ExpressionAtlas; A0A194YMJ3; baseline and differential.
DR GO; GO:0008024; C:cyclin/CDK positive transcription elongation factor complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0061575; F:cyclin-dependent protein serine/threonine kinase activator activity; IBA:GO_Central.
DR GO; GO:0032786; P:positive regulation of DNA-templated transcription, elongation; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.472.10; Cyclin-like; 2.
DR InterPro; IPR013763; Cyclin-like_dom.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR043198; Cyclin/Ssn8.
DR InterPro; IPR006671; Cyclin_N.
DR PANTHER; PTHR10026; CYCLIN; 1.
DR PANTHER; PTHR10026:SF76; CYCLIN-T1-1; 1.
DR Pfam; PF00134; Cyclin_N; 1.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; Cyclin-like; 2.
PE 3: Inferred from homology;
KW Cyclin {ECO:0000256|RuleBase:RU000383};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 53..156
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
FT DOMAIN 169..253
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
FT REGION 411..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..446
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 553 AA; 62849 MW; 66E1C15C28835725 CRC64;
MGAALGEERE QGGCGERYPS WYVSREEIER GSPSRRDGVS AAEEADLRAT YCSFIRDVCI
RLQLPQITIA TAIMLCHRFY LRQSHAKNQW QTVATVCVFL ASKMEDTPCL LKHVVIVAYE
TMYQKNPDAA KRIHQEQEVL AKQKALILVG ETLLLSTIRF DFNIQHPYEP LKFALKKLGI
VQKELRQSAM ALINDMLPTT LVVQFKPHYI AAGSLCLAAE FHNVDLSQNE IIWWHVFDVA
LDPLKVVVQQ MCQLFKKRAP CSMGPVIKPV PTSSAMDKHQ IKLTPTLTPS PMDKHQILIP
TPAPIYRHQS KPIPTPMDKQ QSNLAFHPMD KQQMKPAPTP MDKQQIKLAA APAPAPMYRH
QIKPIPTPMD KQQSNLAPTP MDKQQMRMAA APVLTDRQRI VSAPVPALRH TQSSRRNFSD
GNTEVSSCVT TSSSFNKNST GRSPRNEGNW YRGKNEENPY WRRHINHNLE HRLEERSNQR
TLKSDLAYLV RSGPKDTNAT EIKNLTRQKR RIQEVGGLPT PVYMTDTNAW RQGSGVIVFE
TTSSRQKQKV ERR
//
