ID A0A1B6PFI9_SORBI Unreviewed; 708 AA.
AC A0A1B6PFI9;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 2.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Bromo domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3007G026000 {ECO:0000313|EMBL:KXG24325.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG24325.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG24325.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000766; KXG24325.2; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6PFI9; -.
DR STRING; 4558.A0A1B6PFI9; -.
DR EnsemblPlants; KXG24325; KXG24325; SORBI_3007G026000.
DR Gramene; KXG24325; KXG24325; SORBI_3007G026000.
DR eggNOG; KOG1474; Eukaryota.
DR InParanoid; A0A1B6PFI9; -.
DR OMA; NACWASH; -.
DR Proteomes; UP000000768; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd05506; Bromo_plant1; 1.
DR Gene3D; 1.20.1270.220; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR037377; GTE_bromo.
DR InterPro; IPR027353; NET_dom.
DR InterPro; IPR038336; NET_sf.
DR PANTHER; PTHR46136:SF1; TRANSCRIPTION FACTOR GTE11-RELATED; 1.
DR PANTHER; PTHR46136; TRANSCRIPTION FACTOR GTE8; 1.
DR Pfam; PF17035; BET; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51525; NET; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 104..176
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 290..371
FT /note="NET"
FT /evidence="ECO:0000259|PROSITE:PS51525"
FT REGION 41..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 194..282
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 435..534
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 556..584
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 684..708
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..65
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..272
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 443..478
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..530
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 686..708
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 708 AA; 78807 MW; B69C0648BE3E78A5 CRC64;
MTAVDKKDLE MRLRHELAQV RDLQSRLFSR GPAVSMNGAA VMPAPPAGDV HPKKKVEKLK
RSESMQTDRG APPPVAVAVA PPVASSFNYT SSFKQCANLL KSLMGHGWAG PFLVPVDIVK
LNIPDYFTIV KQPMDLGTIQ KKMKAGMYST PREFAADVRL TFSNAMNYNP VNNDVHLMAK
TLSKNFETRW RLIEKKLPKP DEKPPRDERP PQPDERPPQP VEKPPVREPT KKNSTKRVAI
EKEDPSKKKP SKKNVPKQDI FREEDSADNP VLQPKKRKTS PLVQDAPLVE DIVPTRKRMM
TNEQKYDLSA RLQSYGAFIP DHVVEFIRSH ADNCDADEEE LELDMDALGD DTLFELQKLL
DDYDRVNPSR NLTEEEPHEV ESQSQYELMN PSVCNNELIN PSVCNDEGNE LIDEDVDIGE
NDPPVSTLPP VVLEDETADR SSKHSTSSSS SSGSESSSSD SDSSSSSGSD TDAKAPQQNS
GPKEKILPVD GLDKEKDSLN TLNLPEQSTN PISVSADGEG GNVSEKQVSP DNPDKQIRAA
LLRSRFADTI LKAREKALDQ TTKKDPEKLR REREELERVQ REERARLQAE AKAAEDVRKR
AEAAAAAEAA AEAKRQRELE REAARKALQE MEKTVDINEG SHFLKDLEML GSVTGEQIPN
LVGETSPGFE MGSNTLEKLG LYMKNDEDDE DADFTDEPVV DVEEGEID
//
