ID A0A1B8YAK2_XENTR Unreviewed; 934 AA.
AC A0A1B8YAK2;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Ig-like domain-containing protein {ECO:0000259|PROSITE:PS50835};
DE Flags: Fragment;
GN ORFNames=XENTR_v900266311mg {ECO:0000313|EMBL:OCA19953.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|EMBL:OCA19953.1};
RN [1] {ECO:0000313|EMBL:OCA19953.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Nigerian {ECO:0000313|EMBL:OCA19953.1};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Ottilar R., Schmutz J., Salamov A., Cheng J.F., Lucas S., Pitluck S.,
RA Gundlach H., Guo Y., Haberer G., Nasrallah J., Mayer K.F.X.,
RA van de Peer Y., Weigel D., Grigoriev I.V.;
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OCA19953.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|EMBL:OCA19953.1};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L.,
RA Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R.,
RA Gerhard D.S., Goodstein D., Graves T., Grigoriev I.V., Grimwood J.,
RA Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H.,
RA Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K.,
RA Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A.,
RA Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T.,
RA Khokha M.K., Richardson P.M., Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [3] {ECO:0000313|EMBL:OCA19953.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Nigerian {ECO:0000313|EMBL:OCA19953.1};
RA Sessions A., Jenkins J., Mitros T., Lyons J.T., Dichmann D.S., Robert J.,
RA Harland R.M., Rokhsar D.S.;
RT "WGS assembly of Xenopus tropicalis.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KV460360; OCA19953.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B8YAK2; -.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00096; Ig; 1.
DR CDD; cd05763; IgI_LRIG1-like; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 3.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013098; Ig_I-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR45842:SF12; KEKKON 5, ISOFORM A; 1.
DR PANTHER; PTHR45842; SYNAPTIC ADHESION-LIKE MOLECULE SALM; 1.
DR Pfam; PF07679; I-set; 2.
DR Pfam; PF13927; Ig_3; 1.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF13855; LRR_8; 4.
DR SMART; SM00409; IG; 3.
DR SMART; SM00408; IGc2; 3.
DR SMART; SM00365; LRR_SD22; 5.
DR SMART; SM00369; LRR_TYP; 12.
DR SMART; SM00082; LRRCT; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 3.
DR SUPFAM; SSF52058; L domain-like; 1.
DR PROSITE; PS50835; IG_LIKE; 3.
DR PROSITE; PS51450; LRR; 5.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius}; Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 674..700
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 373..472
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 477..566
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 571..659
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT REGION 884..934
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 903..934
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OCA19953.1"
SQ SEQUENCE 934 AA; 102056 MW; 4339F6D657C43114 CRC64;
HHNKIRSIDP SQLKPYVALE TLDLSSNELT EIRSGSFPAG LRIKELHLGS NKISSLEPGS
FDSLSRSLLT LRLSKNRISQ LPVKVFRLPR LTQLELNRNR IRLIEGLTFQ GLESLEVLKL
QRNNISKLTD GAFWGLSRMQ ILHLENNSLT EVNSGSLYGL LSLQQLHLSH NSISTISSAG
WSFCQKLQEL VLSHNNLTRL DEGSLADLGV LDVLRLSYNS ISHIAEGAFK GLKSLRILEL
DHNEISGTIE DTNGAFIGLE SLNKLTLFGN KIKSVAKRAF SGIESLEHLN LGENALRSVH
SEAFGEMKNL KELVVGSSSF LCDCHLKWLP QWLTSRRLQT KVKASCAHPG SLNNTSIFSV
PPRSFVCDDL PKPQIRVQPE TTMAVLGKAI RFTCSAASSS PSPMTFAWKK DNEILHNAEV
ENFASGTERE GEVTEYTTIL HLRNLTFAHE GRYQCIITND FGPSYSSKAR LTVNVLPSFI
KTPRDSTIRA GTRARLECAA DGHPTPEIAW QKDGGTDFPA ARERRMHVMP DDDVFFIMDV
KIEDMGVYSC TAQNSAGSVS ANATLTVLEM PFLVHPLEDR VVSTGATLAL QCKASGSPPP
RITWLKGDEP LVMTERHHYT PGNQLLIIRQ VMSEDAGKYT CEMSNTLGTE RAYSHVSIAS
TAGCQGEKDK MEGMMTFGII TIAVVCSIVL TSLVWVCIIY QTRKKSEVYS VTNTDETIVP
PDVPSYLSSQ GLCSSDGSVN PEAEACSVAY RQPRLCTCSS GEACKTADGL FGPESTGFGF
QVVCTDCLDG GAGYSSKSDY CPQTVQSVDC SYQKPAGSHD RYMCNGDTPT ALSYHHNAAM
DEGSNLESGG NMYPSNHERI GTAKALNSNL LDPCAEPLIR SPESEGFRAA PSSDCYPYPD
PSSEDSAKQT LLPNGHAPTL SGQHRAQTGS SAPK
//
