ID A0DKC7_PARTE Unreviewed; 531 AA.
AC A0DKC7;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE SubName: Full=Chromosome undetermined scaffold_54, whole genome shotgun sequence {ECO:0000313|EMBL:CAK83494.1};
GN ORFNames=GSPATT00017823001 {ECO:0000313|EMBL:CAK83494.1};
OS Paramecium tetraurelia.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
OC Oligohymenophorea; Peniculida; Parameciidae; Paramecium.
OX NCBI_TaxID=5888 {ECO:0000313|EMBL:CAK83494.1, ECO:0000313|Proteomes:UP000000600};
RN [1] {ECO:0000313|EMBL:CAK83494.1, ECO:0000313|Proteomes:UP000000600}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Stock d4-2 {ECO:0000313|EMBL:CAK83494.1,
RC ECO:0000313|Proteomes:UP000000600};
RX PubMed=17086204; DOI=10.1038/nature05230;
RG Genoscope;
RA Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M.,
RA Segurens B., Daubin V., Anthouard V., Aiach N., Arnaiz O., Billaut A.,
RA Beisson J., Blanc I., Bouhouche K., Camara F., Duharcourt S., Guigo R.,
RA Gogendeau D., Katinka M., Keller A.-M., Kissmehl R., Klotz C., Koll F.,
RA Le Moue A., Lepere C., Malinsky S., Nowacki M., Nowak J.K., Plattner H.,
RA Poulain J., Ruiz F., Serrano V., Zagulski M., Dessen P., Betermier M.,
RA Weissenbach J., Scarpelli C., Schachter V., Sperling L., Meyer E.,
RA Cohen J., Wincker P.;
RT "Global trends of whole-genome duplications revealed by the ciliate
RT Paramecium tetraurelia.";
RL Nature 444:171-178(2006).
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DR EMBL; CT868474; CAK83494.1; -; Genomic_DNA.
DR RefSeq; XP_001450891.1; XM_001450854.1.
DR AlphaFoldDB; A0DKC7; -.
DR STRING; 5888.A0DKC7; -.
DR EnsemblProtists; CAK83494; CAK83494; GSPATT00017823001.
DR GeneID; 5036676; -.
DR KEGG; ptm:GSPATT00017823001; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_513374_0_0_1; -.
DR InParanoid; A0DKC7; -.
DR OMA; FTIMIKS; -.
DR Proteomes; UP000000600; Partially assembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47934:SF6; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1-RELATED; 1.
DR PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000600}.
FT REPEAT 153..187
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 222..342
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 259..294
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 295..329
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 531 AA; 62289 MW; 0F1809AA28A2E7EE CRC64;
MFIIHTKLIA QFAKKQALKS MFAPIQRSQP IKESEEFKEV KKLFSKINDE DNIKQSILES
YQPQHILKQI DTNLTNYFQK RAVDIKSVNF LLQAVVAQNK FDQIDEIQQF MDNLKIKPNQ
QTYMCLINAY GKFRNVEKAE AYYHIAQKQF GSSLHLYNTL INVYCKNLQS ENALRIFNDL
KRDGFEPDIP IYTTLINSFY RVKQWKKCWD LFDEARLESH LKPDENLIGL MIEICADTHE
AEKAIQLHDQ MNDMEFRDTT YIYNSIIKAL GSRKDYAEKA LEFYRKMVLT SVQIDSDTIV
CTLKACSQCG DVKIAHEVIK QMKQYQITPN KYIYTQIIRV YIGACSLPNL DNKIVEEYIK
DAWKIFNEAA SKQMISQRTL NSMCELMVAA NRLPDLEGQV LPLFDQYQIQ KDQFTYEQII
KILFNEKRLL DLYRMFEIVS TKMKPTFQSV SNYLDTAILL ADEEKVVDAL EWFKKIERQP
KYKQIKQLGT MKNLPLRIHA LLNEYDAKFG KVSDSVYRME NNQRSAAKNV G
//