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Database: UniProt
Entry: A0DKC7_PARTE
LinkDB: A0DKC7_PARTE
Original site: A0DKC7_PARTE 
ID   A0DKC7_PARTE            Unreviewed;       531 AA.
AC   A0DKC7;
DT   28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2006, sequence version 1.
DT   24-JAN-2024, entry version 67.
DE   SubName: Full=Chromosome undetermined scaffold_54, whole genome shotgun sequence {ECO:0000313|EMBL:CAK83494.1};
GN   ORFNames=GSPATT00017823001 {ECO:0000313|EMBL:CAK83494.1};
OS   Paramecium tetraurelia.
OC   Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
OC   Oligohymenophorea; Peniculida; Parameciidae; Paramecium.
OX   NCBI_TaxID=5888 {ECO:0000313|EMBL:CAK83494.1, ECO:0000313|Proteomes:UP000000600};
RN   [1] {ECO:0000313|EMBL:CAK83494.1, ECO:0000313|Proteomes:UP000000600}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Stock d4-2 {ECO:0000313|EMBL:CAK83494.1,
RC   ECO:0000313|Proteomes:UP000000600};
RX   PubMed=17086204; DOI=10.1038/nature05230;
RG   Genoscope;
RA   Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M.,
RA   Segurens B., Daubin V., Anthouard V., Aiach N., Arnaiz O., Billaut A.,
RA   Beisson J., Blanc I., Bouhouche K., Camara F., Duharcourt S., Guigo R.,
RA   Gogendeau D., Katinka M., Keller A.-M., Kissmehl R., Klotz C., Koll F.,
RA   Le Moue A., Lepere C., Malinsky S., Nowacki M., Nowak J.K., Plattner H.,
RA   Poulain J., Ruiz F., Serrano V., Zagulski M., Dessen P., Betermier M.,
RA   Weissenbach J., Scarpelli C., Schachter V., Sperling L., Meyer E.,
RA   Cohen J., Wincker P.;
RT   "Global trends of whole-genome duplications revealed by the ciliate
RT   Paramecium tetraurelia.";
RL   Nature 444:171-178(2006).
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DR   EMBL; CT868474; CAK83494.1; -; Genomic_DNA.
DR   RefSeq; XP_001450891.1; XM_001450854.1.
DR   AlphaFoldDB; A0DKC7; -.
DR   STRING; 5888.A0DKC7; -.
DR   EnsemblProtists; CAK83494; CAK83494; GSPATT00017823001.
DR   GeneID; 5036676; -.
DR   KEGG; ptm:GSPATT00017823001; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_513374_0_0_1; -.
DR   InParanoid; A0DKC7; -.
DR   OMA; FTIMIKS; -.
DR   Proteomes; UP000000600; Partially assembled WGS sequence.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR033443; PPR_long.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47934:SF6; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1-RELATED; 1.
DR   PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF13041; PPR_2; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   Pfam; PF17177; PPR_long; 1.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   PROSITE; PS51375; PPR; 3.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000600}.
FT   REPEAT          153..187
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          222..342
FT                   /note="Pentacotripeptide-repeat region of PRORP"
FT                   /evidence="ECO:0000259|Pfam:PF17177"
FT   REPEAT          259..294
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          295..329
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   531 AA;  62289 MW;  0F1809AA28A2E7EE CRC64;
     MFIIHTKLIA QFAKKQALKS MFAPIQRSQP IKESEEFKEV KKLFSKINDE DNIKQSILES
     YQPQHILKQI DTNLTNYFQK RAVDIKSVNF LLQAVVAQNK FDQIDEIQQF MDNLKIKPNQ
     QTYMCLINAY GKFRNVEKAE AYYHIAQKQF GSSLHLYNTL INVYCKNLQS ENALRIFNDL
     KRDGFEPDIP IYTTLINSFY RVKQWKKCWD LFDEARLESH LKPDENLIGL MIEICADTHE
     AEKAIQLHDQ MNDMEFRDTT YIYNSIIKAL GSRKDYAEKA LEFYRKMVLT SVQIDSDTIV
     CTLKACSQCG DVKIAHEVIK QMKQYQITPN KYIYTQIIRV YIGACSLPNL DNKIVEEYIK
     DAWKIFNEAA SKQMISQRTL NSMCELMVAA NRLPDLEGQV LPLFDQYQIQ KDQFTYEQII
     KILFNEKRLL DLYRMFEIVS TKMKPTFQSV SNYLDTAILL ADEEKVVDAL EWFKKIERQP
     KYKQIKQLGT MKNLPLRIHA LLNEYDAKFG KVSDSVYRME NNQRSAAKNV G
//
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