ID A0LLA1_SYNFM Unreviewed; 433 AA.
AC A0LLA1;
DT 12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT 12-DEC-2006, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=RNA polymerase, sigma 70 subunit, RpoD family {ECO:0000313|EMBL:ABK18203.1};
GN OrderedLocusNames=Sfum_2525 {ECO:0000313|EMBL:ABK18203.1};
OS Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).
OC Bacteria; Thermodesulfobacteriota; Syntrophobacteria; Syntrophobacterales;
OC Syntrophobacteraceae; Syntrophobacter.
OX NCBI_TaxID=335543 {ECO:0000313|EMBL:ABK18203.1, ECO:0000313|Proteomes:UP000001784};
RN [1] {ECO:0000313|EMBL:ABK18203.1, ECO:0000313|Proteomes:UP000001784}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 10017 / MPOB {ECO:0000313|Proteomes:UP000001784};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E.G.,
RA Martinez M., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Kim E., Boone D.R., Brockman F., Culley D., Ferry J., Gunsalus R.,
RA McInerney M.J., Morrison M., Plugge C., Rohlin L., Scholten J., Sieber J.,
RA Stams A.J.M., Worm P., Henstra A.M., Richardson P.;
RT "Complete sequence of Syntrophobacter fumaroxidans MPOB.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000478; ABK18203.1; -; Genomic_DNA.
DR RefSeq; WP_011699371.1; NC_008554.1.
DR AlphaFoldDB; A0LLA1; -.
DR STRING; 335543.Sfum_2525; -.
DR KEGG; sfu:Sfum_2525; -.
DR eggNOG; COG0568; Bacteria.
DR HOGENOM; CLU_014793_3_4_7; -.
DR InParanoid; A0LLA1; -.
DR OrthoDB; 9809557at2; -.
DR Proteomes; UP000001784; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000001784};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 225..238
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
SQ SEQUENCE 433 AA; 50185 MW; 65689384D786C56D CRC64;
MKVYASEKCL PIEYYFKRKE LRGEFDLIDD QVLDERLKRA NLGLEEDRDM EGPEAEDILE
AAAEREEEDE DLLPEGVTAA GEDFEEDHVT CYLKEVSSYP LLTQERETEL AQVIREGQEE
LVRMVCECST EDRLAADLHQ KVQKLLDSEK SFPGVRDKIL KVIVRTFERG TMDYPGNARY
REMLVRSRAI MLAIDSAKQE MVKANLRLVL SIAKRYRGRG MSFDDLIQEG NLGLLKAVGR
FDHTKGNRFS TYATWWVRQS IIRGIYDKTR TIRLPVHFIE LKNLFFKVFY ELLKELGREP
SPQEIAERAK LPLDKVQMVL TLAAQPISLE TPIGEDEQRL GDFIEDERAA SPMEECSDRE
LAEITRSLLS SLQPREEKIL RLRFGIDGQP AETLEKIGKT FKVSKERIRQ IEKKALRKLR
NPNRQSCLKT FME
//
