ID A0Q232_CLONN Unreviewed; 278 AA.
AC A0Q232;
DT 09-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2007, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE SubName: Full=S1 RNA binding domain {ECO:0000313|EMBL:ABK62325.1};
GN OrderedLocusNames=NT01CX_0180 {ECO:0000313|EMBL:ABK62325.1};
OS Clostridium novyi (strain NT).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=386415 {ECO:0000313|EMBL:ABK62325.1, ECO:0000313|Proteomes:UP000008220};
RN [1] {ECO:0000313|EMBL:ABK62325.1, ECO:0000313|Proteomes:UP000008220}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NT {ECO:0000313|EMBL:ABK62325.1,
RC ECO:0000313|Proteomes:UP000008220};
RX PubMed=17115055; DOI=10.1038/nbt1256;
RA Bettegowda C., Huang X., Lin J., Cheong I., Kohli M., Szabo S.A., Zhang X.,
RA Diaz L.A. Jr., Velculescu V.E., Parmigiani G., Kinzler K.W., Vogelstein B.,
RA Zhou S.;
RT "The genome and transcriptomes of the anti-tumor agent Clostridium novyi-
RT NT.";
RL Nat. Biotechnol. 24:1573-1580(2006).
CC -!- SIMILARITY: Belongs to the CvfB family.
CC {ECO:0000256|PIRNR:PIRNR012524}.
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DR EMBL; CP000382; ABK62325.1; -; Genomic_DNA.
DR RefSeq; WP_011722672.1; NC_008593.1.
DR AlphaFoldDB; A0Q232; -.
DR STRING; 386415.NT01CX_0180; -.
DR KEGG; cno:NT01CX_0180; -.
DR PATRIC; fig|386415.7.peg.1715; -.
DR eggNOG; COG2996; Bacteria.
DR HOGENOM; CLU_064885_0_1_9; -.
DR Proteomes; UP000008220; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 3.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR014464; CvfB_fam.
DR InterPro; IPR039566; CvfB_S1_st.
DR InterPro; IPR040764; CvfB_WH.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR37296; CONSERVED VIRULENCE FACTOR B; 1.
DR PANTHER; PTHR37296:SF1; CONSERVED VIRULENCE FACTOR B; 1.
DR Pfam; PF17783; CvfB_WH; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF13509; S1_2; 2.
DR PIRSF; PIRSF012524; YitL_S1; 1.
DR SMART; SM00316; S1; 3.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008220}.
FT DOMAIN 147..208
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 278 AA; 31284 MW; 65E47DCB3EEF833E CRC64;
MIEIGKIQTL KVSNIAKIGA YLDAGTGEQN DNILLPNNQL PESIEEGDEV EVFVYRDSED
RLIATRKTPL VQAGELAILE VKDTTRIGAF LDIGLERDVL LPFKEQKYKV LPGKKYLVGL
YIDKSGRLTA TTYVSKFLSS DSPYKKGEWV KGTIYSINKE IGALVAVDNK YKGLIPRSEV
YKELKVGDSV ECRIIRVRDD GKLDLGTREV AYKQMDSDSE MILEKLKKYD GFMSLNDKSN
PEEIKDRLKI SKAAFKRAVG RLLKEGKIVQ TEKGIKLK
//
