ID A1B1R0_PARDP Unreviewed; 461 AA.
AC A1B1R0;
DT 23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 23-JAN-2007, sequence version 1.
DT 03-MAY-2023, entry version 88.
DE SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABL69454.1};
GN OrderedLocusNames=Pden_1350 {ECO:0000313|EMBL:ABL69454.1};
OS Paracoccus denitrificans (strain Pd 1222).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Paracoccus.
OX NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL69454.1, ECO:0000313|Proteomes:UP000000361};
RN [1] {ECO:0000313|Proteomes:UP000000361}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S.,
RA Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M.,
RA Richardson P.;
RT "Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP000489; ABL69454.1; -; Genomic_DNA.
DR RefSeq; WP_011747672.1; NC_008686.1.
DR AlphaFoldDB; A1B1R0; -.
DR STRING; 318586.Pden_1350; -.
DR EnsemblBacteria; ABL69454; ABL69454; Pden_1350.
DR GeneID; 75500862; -.
DR KEGG; pde:Pden_1350; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR HOGENOM; CLU_046383_0_0_5; -.
DR OMA; FHFVDNY; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000000361; Chromosome 1.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000361};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 461 AA; 50131 MW; 45F1C2020D3071D5 CRC64;
MTKSFMGVRL RRLREERGMT QAALARALGI SPSYLNQIEQ NQRPLTVPVL LRLNGAFGLD
VQLFSDAEEA RLITDLRAAL ADQGAPAATA ELRELASNMP GIARAIVAMQ ARLRETAERA
DLLAGRLTEP QAAATPAAFE AVRDWFYDRR NHVPELETSA EAIGSALPPG RMAAGLVDRL
AGRHGIRIAL DADSLRRFDS GARILHLAPH LNEGQQAFQI ATQLAFLEQG ETIARLSDDP
DLASDAQALL RIGLANYFAG ALILPYGAFL QEAEAVAYDI DLISRRFGVG FETACHRLST
LQRPEARGVP FFFIRVDRAG NISKRQSATD FHFSRIGGSC PLWNVYEAFS RPGEIVRQIA
QMPDGRSYLW IARVVSHGRG GFGAPVKTFA VALGCDLAHA DRLVYARGLD LKNPELATRI
GPGCKVCERP ACPQRAFPMV GRPLAVSIAE ARFAPYSAAP G
//