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Database: UniProt
Entry: A1B1R0_PARDP
LinkDB: A1B1R0_PARDP
Original site: A1B1R0_PARDP 
ID   A1B1R0_PARDP            Unreviewed;       461 AA.
AC   A1B1R0;
DT   23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT   23-JAN-2007, sequence version 1.
DT   03-MAY-2023, entry version 88.
DE   SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABL69454.1};
GN   OrderedLocusNames=Pden_1350 {ECO:0000313|EMBL:ABL69454.1};
OS   Paracoccus denitrificans (strain Pd 1222).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Paracoccus.
OX   NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL69454.1, ECO:0000313|Proteomes:UP000000361};
RN   [1] {ECO:0000313|Proteomes:UP000000361}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S.,
RA   Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M.,
RA   Richardson P.;
RT   "Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC       regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR   EMBL; CP000489; ABL69454.1; -; Genomic_DNA.
DR   RefSeq; WP_011747672.1; NC_008686.1.
DR   AlphaFoldDB; A1B1R0; -.
DR   STRING; 318586.Pden_1350; -.
DR   EnsemblBacteria; ABL69454; ABL69454; Pden_1350.
DR   GeneID; 75500862; -.
DR   KEGG; pde:Pden_1350; -.
DR   eggNOG; COG1396; Bacteria.
DR   eggNOG; COG3800; Bacteria.
DR   HOGENOM; CLU_046383_0_0_5; -.
DR   OMA; FHFVDNY; -.
DR   OrthoDB; 1123084at2; -.
DR   Proteomes; UP000000361; Chromosome 1.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR026281; HTH_RamB.
DR   InterPro; IPR010359; IrrE_HExxH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR018653; ScfR_C.
DR   PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR   Pfam; PF13560; HTH_31; 1.
DR   Pfam; PF06114; Peptidase_M78; 1.
DR   Pfam; PF09856; ScfRs; 1.
DR   PIRSF; PIRSF019251; Rv0465c; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000361};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          10..64
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   461 AA;  50131 MW;  45F1C2020D3071D5 CRC64;
     MTKSFMGVRL RRLREERGMT QAALARALGI SPSYLNQIEQ NQRPLTVPVL LRLNGAFGLD
     VQLFSDAEEA RLITDLRAAL ADQGAPAATA ELRELASNMP GIARAIVAMQ ARLRETAERA
     DLLAGRLTEP QAAATPAAFE AVRDWFYDRR NHVPELETSA EAIGSALPPG RMAAGLVDRL
     AGRHGIRIAL DADSLRRFDS GARILHLAPH LNEGQQAFQI ATQLAFLEQG ETIARLSDDP
     DLASDAQALL RIGLANYFAG ALILPYGAFL QEAEAVAYDI DLISRRFGVG FETACHRLST
     LQRPEARGVP FFFIRVDRAG NISKRQSATD FHFSRIGGSC PLWNVYEAFS RPGEIVRQIA
     QMPDGRSYLW IARVVSHGRG GFGAPVKTFA VALGCDLAHA DRLVYARGLD LKNPELATRI
     GPGCKVCERP ACPQRAFPMV GRPLAVSIAE ARFAPYSAAP G
//
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