ID A1SNC5_NOCSJ Unreviewed; 405 AA.
AC A1SNC5;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE SubName: Full=Exonuclease, RNase T and DNA polymerase III {ECO:0000313|EMBL:ABL83310.1};
GN OrderedLocusNames=Noca_3810 {ECO:0000313|EMBL:ABL83310.1};
OS Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL83310.1, ECO:0000313|Proteomes:UP000000640};
RN [1] {ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J.,
RA Richardson P.;
RT "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABL83310.1, ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX PubMed=21551312; DOI=10.1128/JB.05109-11;
RA Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C., Copeland A.,
RA Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A., Hammon N.M., Han S.,
RA Hauser L.J., Israni S., Kim E., Kyrpides N., Land M.L., Lapidus A.,
RA Larimer F.W., Lucas S., Pitluck S., Richardson P., Schmutz J., Tapia R.,
RA Thompson S., Tice H.N., Spain J.C., Gossett J.G., Mattes T.E.;
RT "Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete
RT Nocardioides sp. strain JS614.";
RL J. Bacteriol. 193:3399-3400(2011).
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DR EMBL; CP000509; ABL83310.1; -; Genomic_DNA.
DR RefSeq; WP_011757241.1; NC_008699.1.
DR AlphaFoldDB; A1SNC5; -.
DR STRING; 196162.Noca_3810; -.
DR KEGG; nca:Noca_3810; -.
DR eggNOG; COG0272; Bacteria.
DR eggNOG; COG0847; Bacteria.
DR HOGENOM; CLU_029910_2_1_11; -.
DR OrthoDB; 190275at2; -.
DR Proteomes; UP000000640; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd17748; BRCT_DNA_ligase_like; 1.
DR CDD; cd06127; DEDDh; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR029024; TerB-like.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF00533; BRCT; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF158682; TerB-like; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Exonuclease {ECO:0000313|EMBL:ABL83310.1};
KW Hydrolase {ECO:0000313|EMBL:ABL83310.1};
KW Nuclease {ECO:0000313|EMBL:ABL83310.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000640}.
FT DOMAIN 3..169
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
SQ SEQUENCE 405 AA; 43695 MW; 4E11E7AB6E9E15CB CRC64;
MTGYTIIDLE TTGLFPQKHD RIVEIGLIEV SDSGAIEREW ATLVNPQRDV GPTHIHGITA
RDVLDAPTFQ EVAPYLIGSL AGRTLVAHNA RFDTQFLDYE FERASVGTRP PTPSLCTMQL
SSSYLRGASR KLKDCCVAAN VPHADEHTAL GDARAVAGLL NYYLVNTDRP VPWSAVLEST
RRHWWPAPGP TPGRPRSVLR SATPREPAAW LDRITSTLPR NPNPMVEAYL DVLEQALLDG
YLSAHEENAL VDLALSLGLH RDHLAAVHAT YLDSMAIAAW ADGMVTETEL ADLTSVATAL
GLPTDLVRVA IKRAKNVAAH ATSEGGFKLC VGDQVVFTGE LSVPRDQLID LAQQAGLKHG
GVNKSTKLVV AADPDSQSGK AAKARSYGIP VVTEAAFARM LADLH
//
