ID A1SPU2_NOCSJ Unreviewed; 485 AA.
AC A1SPU2;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ABL83827.1};
GN OrderedLocusNames=Noca_4330 {ECO:0000313|EMBL:ABL83827.1};
OS Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL83827.1, ECO:0000313|Proteomes:UP000000640};
RN [1] {ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J.,
RA Richardson P.;
RT "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABL83827.1, ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX PubMed=21551312; DOI=10.1128/JB.05109-11;
RA Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C., Copeland A.,
RA Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A., Hammon N.M., Han S.,
RA Hauser L.J., Israni S., Kim E., Kyrpides N., Land M.L., Lapidus A.,
RA Larimer F.W., Lucas S., Pitluck S., Richardson P., Schmutz J., Tapia R.,
RA Thompson S., Tice H.N., Spain J.C., Gossett J.G., Mattes T.E.;
RT "Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete
RT Nocardioides sp. strain JS614.";
RL J. Bacteriol. 193:3399-3400(2011).
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DR EMBL; CP000509; ABL83827.1; -; Genomic_DNA.
DR RefSeq; WP_011757756.1; NC_008699.1.
DR AlphaFoldDB; A1SPU2; -.
DR STRING; 196162.Noca_4330; -.
DR KEGG; nca:Noca_4330; -.
DR eggNOG; COG3409; Bacteria.
DR HOGENOM; CLU_608112_0_0_11; -.
DR OrthoDB; 5171321at2; -.
DR Proteomes; UP000000640; Chromosome.
DR CDD; cd06418; GH25_BacA-like; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 2.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR002477; Peptidoglycan-bd-like.
DR InterPro; IPR036365; PGBD-like_sf.
DR InterPro; IPR036366; PGBDSf.
DR InterPro; IPR015020; Rv2525c-like_Glyco_Hydro-like.
DR InterPro; IPR006311; TAT_signal.
DR Pfam; PF01471; PG_binding_1; 1.
DR Pfam; PF08924; Rv2525c_GlyHyd-like; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF47090; PGBD-like; 2.
DR PROSITE; PS51318; TAT; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000640};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..41
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 42..485
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002637332"
FT DOMAIN 97..315
FT /note="Rv2525c-like glycoside hydrolase-like"
FT /evidence="ECO:0000259|Pfam:PF08924"
FT DOMAIN 424..480
FT /note="Peptidoglycan binding-like"
FT /evidence="ECO:0000259|Pfam:PF01471"
FT REGION 37..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..63
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 485 AA; 52462 MW; 60465B5D60949E3D CRC64;
MSRPHLRTPR TLLRRALVTA TGGLLAVTTV AALGTGGPAD AAGTAPTATS TTTSTTTSTA
AKPAAKRAAN PVTPGDFTGF GFDQCHTPEQ RKMNRWLQSS PFLAVGIYIS GDSRACREQP
ELTPTWVRTQ LAKGWRLLPI TLGPQASCQP RFPRYGDDET IIPRPGANGG YSKAKKQGNA
EAVKSVGVAA DLGIAPGSTL WYDLEGFDLR NTRCRESALA FLSGWTWQIH RLGYASGVYS
GASSGIKMLD DARVNRPGQV VLPDQIWLAR WDGKANTSSS YLREDGWRPH ARIKQYQGGH
DETWGGVTIN IDRNFLDVGR GMVAPSETHC GGVRVNFRNY ETLRPPTETT TPGPGQVSAL
QCLLTEQEFY GGAINGRWTK ATVKAIQAWQ AGHDMAQREV WSRKNWMSLL SAGETPVLKL
GSTGLAVRRL QRTLNAAGVS DSVRMNGMFK AETADAVRAY QQQVGTEVSG VAGYRTWRAL
SAGRL
//
