ID A1VLJ8_POLNA Unreviewed; 1991 AA.
AC A1VLJ8;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABM36526.1};
GN OrderedLocusNames=Pnap_1211 {ECO:0000313|EMBL:ABM36526.1};
OS Polaromonas naphthalenivorans (strain CJ2).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas.
OX NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM36526.1, ECO:0000313|Proteomes:UP000000644};
RN [1] {ECO:0000313|Proteomes:UP000000644}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT tar-contaminated sediment, reveals physiological and metabolic versatility
RT and evolution through extensive horizontal gene transfer.";
RL Environ. Microbiol. 11:2253-2270(2009).
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DR EMBL; CP000529; ABM36526.1; -; Genomic_DNA.
DR RefSeq; WP_011800619.1; NC_008781.1.
DR STRING; 365044.Pnap_1211; -.
DR KEGG; pna:Pnap_1211; -.
DR eggNOG; COG1112; Bacteria.
DR eggNOG; COG2852; Bacteria.
DR HOGENOM; CLU_000788_0_1_4; -.
DR OrthoDB; 9757917at2; -.
DR Proteomes; UP000000644; Chromosome.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR Gene3D; 3.40.960.10; VSR Endonuclease; 1.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR021754; DUF3320.
DR InterPro; IPR025103; DUF4011.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR049468; Restrct_endonuc-II-like_dom.
DR InterPro; IPR047187; SF1_C_Upf1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF525; HELICASE SENATAXIN-RELATED; 1.
DR Pfam; PF13086; AAA_11; 1.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF11784; DUF3320; 1.
DR Pfam; PF13195; DUF4011; 1.
DR Pfam; PF18741; MTES_1575; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52980; Restriction endonuclease-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT DOMAIN 1350..1392
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 1418..1609
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
FT DOMAIN 1660..1757
FT /note="Restriction endonuclease type II-like"
FT /evidence="ECO:0000259|Pfam:PF18741"
FT DOMAIN 1824..1872
FT /note="DUF3320"
FT /evidence="ECO:0000259|Pfam:PF11784"
SQ SEQUENCE 1991 AA; 218108 MW; 4DC1A6197D840BAF CRC64;
MSYLQNDPLA MNGAMADDPA AAPEAQIRID IEADATTGYA AIQNAVPVVR ALRLTNLMAE
TVENLEVVVS CSPAFARGLK LRFDKLAAGE TRRISPLDLQ PDHAFLADLK ESVNASIRVV
AEAGGQELAS ATQPVQVLAY DQWAGTRALP ELLAAFCMPN NPAVDVLIGK ASRLLRASHP
ELSMNGYQSK NRDVVWKQVS SIYSTIAAEN LQYVEPPASF GADGQKIRMP DRILDARVAT
CLDLAMLFAS CLEQAGLRPV ILLKEGHAWV GVWLHLASFS DALIDDVQAI RKRVDSGEFL
VFETTGAARH ASSRPSLRIA MEQGHAHLLE DASFRYAIDI HRAREVQIKP LPSRALPLIP
GELAPEDAPA AIEPMPLLPP LDSDSLAPLD VRADDTPEGR LSTWKSRLLD LTLRNRLLNF
KPTKATLQLV APELARLEDA LADGAEFKIR PLPDLMEGAD PRMAELHTQR AGSTPLDDMA
LEALGNRELL ARASKDALDG NLLAIYSAAR TGLEEGGANT LYLALGLLRW TEAEKADAVH
LAPLLLIPVT LQRQSVRSGF RLIRHDDEAI VNPTLLHLLK TSFELKVAGL DVVPTDDKGV
DVARVLQSFR LAVREIAQWE VLEQAHLGIF SFTKYLMWKD LQDRTEQLKQ SRVVRHLIDK
PGEAFAREGT DGEFDRLDIT HRPQDILTPL LSDSSQLKAI CAVDAGRDLV LEGPPGTGKS
QTITNLIAHS LAKGKTVLFV SEKMAALEVV HRRLSSIGLG PFCLELHSSK AKKTDVLQQL
GKSLAISAQR TADDWAREAG RLGQMRQSLN GLVDSLHHEY PNGFTVFEAT GTCIAHTGKE
ASAMPWLDPL THDRADLDRL EETARRMASL AGALPTLENH PLSLIGQTDW SNSWQDELLG
AAKALEAAIR SLQEKSPALG SLTGQPTTGL SLDAYAALDQ LADVLLLAPG VPAGLAGQAH
DPGARARVHA LAQHGLARNQ HWQQIGPGWT EQVATLNAVE LQGQWAQASS DWWPKSMLAQ
RALIGRLSGF RTDSQRPGEA DVQALLAPLA ALNEEDRVLR SLQADAEALL QESYAGLKTD
WASLAAHELW AKKFADAVTR VAGADLAQVN PLHQALAPLV SSNRAALAAG GQAGRALLAY
RDAWREFSQK FDALETLAQP VDPLQGPDGA QGALERIQGV LSAWQLNRRL IQPWCLWRNV
REQAMDQGLQ ALVASLENGE VPLGEVESHF KFSYRNWWLK KTIDRDPLLR GFSSADHARK
IHEFRDADVR FQKLTEDYIV ATLSGHIPSL AGSAVGPDSE LGRLRRELQK KSRQMPVRQL
VRGLPTLLPK LKPCLLMSPL SVAQYLDAGY APFDLVVFDE ASQIPVWDAI GAIARGRQLV
VVGDAKQLPP TSFFSKSGDP EGGAHGMGEE PVEDLESILD ECLGAGMNRL SLQWHYRSRH
ESLITFSNVN YYDSSLITFP SPVTDDSAVR FEHVAGVYDR GGSRTNRLEA DAIVEGIAEH
YLSPHKKHLT LGVVTFNQPQ QLLIETLVDA RRRASPELDR AIAARANEPL FIKNLENVQG
DERDVIFFSI TYGPDAAGKT TMNFGPLNGE GGQRRLNVAI SRAREAVVIY STLRPEQIDL
ARVRAAGVRD LKHYLEFAIK GYRALAEQSL PTGQEPDSPF EVAVIRLLRK HGWEVHPQVG
CSGYRLDIGV VDPRAPGRYL AGIECDGATY HSAATARDRD RLRQHVLEGL GWHILRIWST
DWWLNPEGEI EKISQRLKAI VVMPDDAQAA SAVQVPAALQ ADPEPAPESE AAQGLPMEPD
GFPGEEEILA IYRPASLPAG DPLMFHDASA LPDLEEHLAH VIEAEGPLTE TALFRKVAHA
WGIGRIGAKV SERLRTLTPE RFVRTIEEEA IFYWPAQSDT ASWEQFRIAD ASEPSRRHVD
EVCLEELAAL AHHVLQQAGT SSRQDAARSV CLLLGMSRVP EEAEARANEA MNRLIASELV
VDIEGQVRLV E
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