ID   A1VQ45_POLNA            Unreviewed;       514 AA.
AC   A1VQ45;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   27-MAR-2024, entry version 74.
DE   SubName: Full=Integrase, catalytic region {ECO:0000313|EMBL:ABM37773.1};
GN   OrderedLocusNames=Pnap_2468 {ECO:0000313|EMBL:ABM37773.1};
OS   Polaromonas naphthalenivorans (strain CJ2).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Polaromonas.
OX   NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM37773.1, ECO:0000313|Proteomes:UP000000644};
RN   [1] {ECO:0000313|Proteomes:UP000000644}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX   PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA   Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT   "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT   tar-contaminated sediment, reveals physiological and metabolic versatility
RT   and evolution through extensive horizontal gene transfer.";
RL   Environ. Microbiol. 11:2253-2270(2009).
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DR   EMBL; CP000529; ABM37773.1; -; Genomic_DNA.
DR   RefSeq; WP_011801851.1; NC_008781.1.
DR   AlphaFoldDB; A1VQ45; -.
DR   STRING; 365044.Pnap_2468; -.
DR   KEGG; pna:Pnap_2468; -.
DR   eggNOG; COG4584; Bacteria.
DR   HOGENOM; CLU_020626_1_1_4; -.
DR   Proteomes; UP000000644; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   NCBIfam; NF033546; transpos_IS21; 1.
DR   PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR   PANTHER; PTHR35004:SF6; TRANSPOSASE RV3428C-RELATED; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT   DOMAIN          114..298
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          476..514
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        476..490
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   514 AA;  58163 MW;  F6301EED3773669C CRC64;
     MVVTSELRAQ ILRLYLAEHW RVGTIARQLR LHRDTVRRVL AISSVLRALP SAPPRLIDPF
     VPFIKETLAK FPTLAASRLY AMVQERGYGG GSSHFRHLVA PLRARPAAEA YLRLRTLPAE
     QAQVDWAHMG HVVVGRAKRP LMAFVMVLSY SRRIFLHFSL NAQMDNFLRG HVLAFEAWGG
     VPRVILSDNL KSAVLERLGN AIRFNPDYLA FAAHYRFEPR PVAVARGNEK GRVERSIRYI
     RDNFFAARVY TDVADLNAQA KAWTDGPAFS RPWPEGEQLT VRQAFETESP SLMALPMDAY
     PVDARVEVKV AKTPYVRFDL NDYSIPHTHV RRTVTVLANA ERVRVLDGVT VLAEHVRSYD
     KGEQVEITAH VDELIERKRG ARQHRGVSQL TQAIPAMADF LARAATKGHH LASMTRVLGQ
     MLDHYGAQAM QEAVLEALRR DVPHHNAVRL ALERARQERR DSPLVVPQLS ERAKRMDVTV
     KPHRLDAYDE LQAHAQQTDQ SSDGHSTETD EDTQ
//