GenomeNet

Database: UniProt
Entry: A2XRQ6_ORYSI
LinkDB: A2XRQ6_ORYSI
Original site: A2XRQ6_ORYSI 
ID   A2XRQ6_ORYSI            Unreviewed;       613 AA.
AC   A2XRQ6;
DT   20-MAR-2007, integrated into UniProtKB/TrEMBL.
DT   20-MAR-2007, sequence version 1.
DT   24-JAN-2024, entry version 75.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   ORFNames=OsI_15309 {ECO:0000313|EMBL:EAY93516.1};
OS   Oryza sativa subsp. indica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39946 {ECO:0000313|EMBL:EAY93516.1, ECO:0000313|Proteomes:UP000007015};
RN   [1] {ECO:0000313|EMBL:EAY93516.1, ECO:0000313|Proteomes:UP000007015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA   Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA   Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA   Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA   Samudrala R., Wang J., Wong G.K., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM000129; EAY93516.1; -; Genomic_DNA.
DR   AlphaFoldDB; A2XRQ6; -.
DR   STRING; 39946.A2XRQ6; -.
DR   EnsemblPlants; BGIOSGA016107-TA; BGIOSGA016107-PA; BGIOSGA016107.
DR   Gramene; BGIOSGA016107-TA; BGIOSGA016107-PA; BGIOSGA016107.
DR   HOGENOM; CLU_002706_37_5_1; -.
DR   OMA; MILCRRP; -.
DR   Proteomes; UP000007015; Chromosome 4.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007015};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          47..82
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          110..144
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          204..239
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          306..340
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          521..613
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   613 AA;  68306 MW;  13715523A1385BEF CRC64;
     MILCRRPFLA IARSRARSLS TAAVAAAVRH GDLAGAEEAF VSTPRKTTAT YNCLLAGYAR
     APGRLADARH LFDRIPTPDV VSYNTLLLCH FASGDADGAR RLFASMPVRD VASWNTMVSG
     LSKSGAVEEA KVVFLAMPVR NSVSWNAMVS GFACSGDMST AEEWFRNAPE KEDAVLWTAM
     VSGYMDIGNV VKAIKYFEAM PVRNLVSWNA VVAGYVKNSH ADDALRLFRT MVREANVQPN
     ASTLSSVLLG CSNLSALGFG KQIHQWCMKL LLSRNLTVGT SLVSMYCKCG DLSSACILFG
     EMHTRDVVAW NAMISGYAQH GDGKEAINLF ERMKDEGVEP NWITFVVVLT ACIHTGLCDF
     GIQCFEGMQE LYGIEPRVDH YSCMVDLLCR AGKLERAVDF IRSMPFEPHP SAYGTLLAAC
     RVYKNLEFAE LAAGKLIEKD PQSAGAYVQL ANIYAVANQW DDVSRVRRWM KDNTVVKTPG
     YSWIEIKGVL HEFRSNDRLH PQLYLIHEKL GQLAERMKEM GYVPDLDFVL HDVDETMKVQ
     MLMRHSEKLA IAFGLISTAH GMTLRIFKNL RVCGDCHNAA KVISMIEDRE IILRDTTRFH
     HFRGGHCSCD DYW
//
DBGET integrated database retrieval system