ID A2XRQ6_ORYSI Unreviewed; 613 AA.
AC A2XRQ6;
DT 20-MAR-2007, integrated into UniProtKB/TrEMBL.
DT 20-MAR-2007, sequence version 1.
DT 24-JAN-2024, entry version 75.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=OsI_15309 {ECO:0000313|EMBL:EAY93516.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EAY93516.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EAY93516.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
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DR EMBL; CM000129; EAY93516.1; -; Genomic_DNA.
DR AlphaFoldDB; A2XRQ6; -.
DR STRING; 39946.A2XRQ6; -.
DR EnsemblPlants; BGIOSGA016107-TA; BGIOSGA016107-PA; BGIOSGA016107.
DR Gramene; BGIOSGA016107-TA; BGIOSGA016107-PA; BGIOSGA016107.
DR HOGENOM; CLU_002706_37_5_1; -.
DR OMA; MILCRRP; -.
DR Proteomes; UP000007015; Chromosome 4.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007015};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 47..82
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 110..144
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 204..239
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 306..340
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 521..613
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 613 AA; 68306 MW; 13715523A1385BEF CRC64;
MILCRRPFLA IARSRARSLS TAAVAAAVRH GDLAGAEEAF VSTPRKTTAT YNCLLAGYAR
APGRLADARH LFDRIPTPDV VSYNTLLLCH FASGDADGAR RLFASMPVRD VASWNTMVSG
LSKSGAVEEA KVVFLAMPVR NSVSWNAMVS GFACSGDMST AEEWFRNAPE KEDAVLWTAM
VSGYMDIGNV VKAIKYFEAM PVRNLVSWNA VVAGYVKNSH ADDALRLFRT MVREANVQPN
ASTLSSVLLG CSNLSALGFG KQIHQWCMKL LLSRNLTVGT SLVSMYCKCG DLSSACILFG
EMHTRDVVAW NAMISGYAQH GDGKEAINLF ERMKDEGVEP NWITFVVVLT ACIHTGLCDF
GIQCFEGMQE LYGIEPRVDH YSCMVDLLCR AGKLERAVDF IRSMPFEPHP SAYGTLLAAC
RVYKNLEFAE LAAGKLIEKD PQSAGAYVQL ANIYAVANQW DDVSRVRRWM KDNTVVKTPG
YSWIEIKGVL HEFRSNDRLH PQLYLIHEKL GQLAERMKEM GYVPDLDFVL HDVDETMKVQ
MLMRHSEKLA IAFGLISTAH GMTLRIFKNL RVCGDCHNAA KVISMIEDRE IILRDTTRFH
HFRGGHCSCD DYW
//