ID A2ZMR5_ORYSI Unreviewed; 841 AA.
AC A2ZMR5;
DT 20-MAR-2007, integrated into UniProtKB/TrEMBL.
DT 20-MAR-2007, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE RecName: Full=G-patch domain-containing protein {ECO:0000259|PROSITE:PS50174};
GN ORFNames=OsI_39121 {ECO:0000313|EMBL:EAY83899.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EAY83899.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EAY83899.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR017706}.
CC -!- SIMILARITY: Belongs to the TFP11/STIP family.
CC {ECO:0000256|ARBA:ARBA00010900, ECO:0000256|PIRNR:PIRNR017706}.
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DR EMBL; CM000137; EAY83899.1; -; Genomic_DNA.
DR AlphaFoldDB; A2ZMR5; -.
DR STRING; 39946.A2ZMR5; -.
DR EnsemblPlants; BGIOSGA035831-TA; BGIOSGA035831-PA; BGIOSGA035831.
DR Gramene; BGIOSGA035831-TA; BGIOSGA035831-PA; BGIOSGA035831.
DR HOGENOM; CLU_007977_1_0_1; -.
DR OMA; QNEFNPH; -.
DR Proteomes; UP000007015; Chromosome 12.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000390; P:spliceosomal complex disassembly; IEA:InterPro.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR022783; GCFC_dom.
DR InterPro; IPR022159; STIP/TFIP11_N.
DR InterPro; IPR024933; TFP11.
DR InterPro; IPR045211; TFP11/STIP/Ntr1.
DR PANTHER; PTHR23329:SF1; TUFTELIN-INTERACTING PROTEIN 11; 1.
DR PANTHER; PTHR23329; TUFTELIN-INTERACTING PROTEIN 11-RELATED; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF07842; GCFC; 1.
DR Pfam; PF12457; TIP_N; 1.
DR PIRSF; PIRSF017706; TFIP11; 1.
DR SMART; SM00443; G_patch; 1.
DR PROSITE; PS50174; G_PATCH; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW ECO:0000256|PIRNR:PIRNR017706};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|PIRNR:PIRNR017706};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR017706};
KW Reference proteome {ECO:0000313|Proteomes:UP000007015};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728, ECO:0000256|PIRNR:PIRNR017706}.
FT DOMAIN 179..225
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT REGION 1..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 233..261
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 331..365
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 12..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 140..159
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 234..248
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 841 AA; 95222 MW; 638220C37EE6EF1C CRC64;
MEEDAEGMDR FDMEGDFEGG RFGRDGEFYY ERRRERAPQT RDDALYGVFA EGDSDYDSDD
GRRRSRRKRR RDEAEPDLSR PVHFQSAGKF MPSKEPEPEP EERPGLGAAP ASASAVGADD
AAAEEEDLDL PTAFGQRIAE GARARREERA RERETAARRR QASGVAAGKP APALGSLGSN
TKVAKMMAMM GYKDGMGLGK NEQGIVAPVE TTLRPKNAGL GSVEGFKEPK PFFTKENLPP
PPPPAPAKKE QQRWSKKAGA KKGPVLTKNE LLAMRSEQEQ DEQPTVVQKV IDMRGPQARV
LTDLKGLNVE QEMEANDVPM PELQYNVRLL VDEAKADIVR LDGQLRREQE KVASLVREKE
KVAKQEALQK CQLQVMEKIA GVLEQVRVDD TAGVLSLEGL LKTFQELKAC YVEEFKMCSV
AWIACRFAHP LLIRVFQGWQ PLQNPLFGLE IMSSWKDLLQ GDQAYDFSGD VESMAPYAQL
VSEVILPAVR ISGTNSWEAR DPEPMLRFLE SWERLLPPIV LQSILEHVIM PKLSAAVDSW
DPRREKVPIH VWVHPWLPML GQRIDTLCHS IRYKLSSVLH VWQAHDASAY AVLSPWKDVF
DAASWEDLIV RYIVPKLKMA LQEFQINPAN QKLDQFNWVM IWASAIPVHH MVHMLEVDFF
SKWQQVLYHW LCSPSPDFNE IMNWYKGWKG LFPPELLANE RIRMLLTAGL DMMNRAAEGL
EVVQPGAREN VGYLRATEKR QFDAAQQASQ YTTHHAVPGA AMADLSFKES IQAYAMDQGL
LFMPRVGKFY NGMPVYEFGT VSICIDSVKR LLYAQLQEGI ERWSAVSLTQ LIEMNRKARQ
R
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