ID A3ARK0_ORYSJ Unreviewed; 1132 AA.
AC A3ARK0;
DT 20-MAR-2007, integrated into UniProtKB/TrEMBL.
DT 20-MAR-2007, sequence version 1.
DT 27-MAR-2024, entry version 91.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EAZ29939.1};
GN ORFNames=OsJ_13993 {ECO:0000313|EMBL:EAZ29939.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:EAZ29939.1};
RN [1] {ECO:0000313|EMBL:EAZ29939.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EAZ29939.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
CC {ECO:0000256|ARBA:ARBA00008438}.
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DR EMBL; CM000141; EAZ29939.1; -; Genomic_DNA.
DR AlphaFoldDB; A3ARK0; -.
DR HOGENOM; CLU_572915_0_0_1; -.
DR Proteomes; UP000007752; Chromosome 4.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014905; HIRAN.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF22; DNA REPAIR PROTEIN RAD5; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08797; HIRAN; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00910; HIRAN; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 538..725
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 896..937
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 970..1127
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 56..123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 573..592
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 573..589
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1132 AA; 126308 MW; EEA4447FED5070AD CRC64;
MHGDWPESPS QEVLYADEIA AVRAVLGACL PEARVVAAIS RCGGNAERAI NALLDDATAG
VEDKPEPKKG KGAKTAAPPV KAERDAGGAA PKPPPPPVKV EVLDDEPLGS QESNGCSARV
KKEREDELLV KAPPPMPDRV KEEDGVAAKR GAATANAAGI SLVPRPKKRS RVHDEADTID
LTATHPVPYL NPRPIRAVPP PEAMEMLESR RVRARPPPPS SDLRMVVAPP DAEFGEFPEE
RDWFLVGRSY VTGLSTNRGR RRLDAGELVH FSFPSLERTY GGIKVSNKKA AALAEIVRFS
TNRAGEIGKL STEWTKCLVP LVSSSKVKIQ GKIVFPTVEL RLMQEILLYV SFYIHRSVFT
ASGNNSSWDL LAPANVDYST NPLYRLFRLL KLRAFTKADI TPEELAAGKR PRNLRGDDND
EDEPMAIVGL ENRRTAGQTF PEQGTDEQAI SEAALNKIVG TAETYDLEEA EPPSTLVSVL
KPYQKEALFW MSQLEKGIDG DQAKKTLHPC WSAYKIVDKR APAVYVNVFT GEATTQFQSV
TQSARGGILA DAMGLGKTVM TIALILSNPR GELEQDKRGT RDRDTKAQTS RSSVRGGTLI
ICPMALLGQW KDELEAHSTP GALSVFVYYG GDRTTDLRFM AQHSVVLTTY GVLQSAHKND
GSSIFHRIDW YRVVLDEAHT IKSPRTKAAR AAYELTSHCR WCLTGTPLQN NLEDLFSLLC
FLHVEPWGDA SWWNKLIQRP YENGDERGLK LVRAILRPLM LRRTKETKDK MGNPILVLPP
ANIEIVECEQ SEDERDFYEA LFRRSKVQFD KFVAQGSVLN NYANILELLL RLRQCCDHPF
LVISRADTQK YTDLDELAQR FLDGVQRDSA RRSAPPSQAY VEEVVEEIRQ GATTECPICL
ESASDDPVLT PCAHRMCREC LLSSWRTPSG GPCPLCRSPI TKSELITLPS QCRFQVDPEN
NWKDSCKVIK LIKILEGLQE KREKSIVFSQ FTSFFDLLEV PFNQKGIKFL RFDGKLSQKH
REKVLKEFSE SKDKLVLLMS LKAGGVGLNL TAASNVFLMD PWWNPAVEEQ AIMRIPRIGQ
KRAVQVRRFI VKDTVEERMQ KVQACKQRMI SGALTDDEVR SARIEQLKML FT
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