ID A3HUA5_9BACT Unreviewed; 298 AA.
AC A3HUA5;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 2.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=Probable transcriptional regulator, MerR family {ECO:0000313|EMBL:EAZ81727.2};
GN ORFNames=ALPR1_00760 {ECO:0000313|EMBL:EAZ81727.2};
OS Algoriphagus machipongonensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Algoriphagus.
OX NCBI_TaxID=388413 {ECO:0000313|EMBL:EAZ81727.2, ECO:0000313|Proteomes:UP000003919};
RN [1] {ECO:0000313|EMBL:EAZ81727.2, ECO:0000313|Proteomes:UP000003919}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PR1 {ECO:0000313|EMBL:EAZ81727.2,
RC ECO:0000313|Proteomes:UP000003919};
RX PubMed=21183675; DOI=10.1128/JB.01421-10;
RA Alegado R.A., Ferriera S., Nusbaum C., Young S.K., Zeng Q., Imamovic A.,
RA Fairclough S.R., King N.;
RT "Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a
RT colony-forming choanoflagellate.";
RL J. Bacteriol. 193:1485-1486(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAZ81727.2}.
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DR EMBL; AAXU02000001; EAZ81727.2; -; Genomic_DNA.
DR RefSeq; WP_008197716.1; NZ_CM001023.1.
DR AlphaFoldDB; A3HUA5; -.
DR STRING; 388413.ALPR1_00760; -.
DR eggNOG; COG0789; Bacteria.
DR eggNOG; COG5012; Bacteria.
DR HOGENOM; CLU_045945_3_0_10; -.
DR OrthoDB; 9800334at2; -.
DR Proteomes; UP000003919; Chromosome.
DR GO; GO:0031419; F:cobalamin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR CDD; cd01104; HTH_MlrA-CarA; 1.
DR Gene3D; 1.10.1660.10; -; 1.
DR Gene3D; 3.40.50.280; Cobalamin-binding domain; 1.
DR Gene3D; 1.10.1240.10; Methionine synthase domain; 1.
DR InterPro; IPR003759; Cbl-bd_cap.
DR InterPro; IPR036724; Cobalamin-bd_sf.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR InterPro; IPR047057; MerR_fam.
DR InterPro; IPR036594; Meth_synthase_dom.
DR PANTHER; PTHR30204:SF69; HTH-TYPE TRANSCRIPTIONAL REGULATOR ZNTR; 1.
DR PANTHER; PTHR30204; REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR; 1.
DR Pfam; PF02607; B12-binding_2; 1.
DR Pfam; PF13411; MerR_1; 1.
DR SMART; SM00422; HTH_MERR; 1.
DR SUPFAM; SSF52242; Cobalamin (vitamin B12)-binding domain; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000003919}.
FT DOMAIN 3..47
FT /note="HTH merR-type"
FT /evidence="ECO:0000259|PROSITE:PS50937"
SQ SEQUENCE 298 AA; 34085 MW; 852141508522A376 CRC64;
MSRYLIKDLE NLSGIKAHTL RIWEQRYNLL CPKRTDTNIR YYDEADLKLI LNVALLNEKG
HKISKIASMT PECISEEVIK LTDRSLMHDD QIHSLTICMI EMDEEKFEKI LTTNIIKLGF
EQTMLHVIYP FLTKIGVLWQ TGAINPAQEH FISNLVRQKL IVAIDGQVPS SDGKKFMLFL
PEGELHEISL LFATYLIKSK GHKVIYLGQS TPKKDLDAVY ELHAPEFLLT VVTSVPVGDQ
ANNYVEKLAR KFNEATLLVS GIQILDKEYT FSPNVHLLHN INDLKAQLES LEQVPIEK
//