ID A3I0D7_9BACT Unreviewed; 351 AA.
AC A3I0D7;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Transposase {ECO:0000313|EMBL:EAZ79933.1};
GN ORFNames=ALPR1_14929 {ECO:0000313|EMBL:EAZ79933.1}, ALPR1_21197
GN {ECO:0000313|EMBL:EFQ79253.1};
OS Algoriphagus machipongonensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Algoriphagus.
OX NCBI_TaxID=388413 {ECO:0000313|EMBL:EAZ79933.1, ECO:0000313|Proteomes:UP000003919};
RN [1] {ECO:0000313|EMBL:EAZ79933.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PR1 {ECO:0000313|EMBL:EAZ79933.1};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Cuomo C., Shea T., Young S.K., Zeng Q., Koehrsen M., Haas B.,
RA Borodovsky M., Guigo R., Alvarado L., Berlin A., Bochicchio J.,
RA Borenstein D., Chapman S., Chen Z., Freedman E., Gellesch M., Goldberg J.,
RA Griggs A., Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D.,
RA Larson L., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shenoy N.,
RA Sisk P., Stolte C., Sykes S., Thomson T., Walk T., White J., Yandava C.,
RA Burger G., Gray M.W., Holland P.W.H., King N., Lang F.B.F., Roger A.J.,
RA Ruiz-Trillo I., Lander E., Nusbaum C.;
RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EAZ79933.1, ECO:0000313|Proteomes:UP000003919}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PR1 {ECO:0000313|EMBL:EAZ79933.1,
RC ECO:0000313|Proteomes:UP000003919};
RX PubMed=21183675; DOI=10.1128/JB.01421-10;
RA Alegado R.A., Ferriera S., Nusbaum C., Young S.K., Zeng Q., Imamovic A.,
RA Fairclough S.R., King N.;
RT "Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a
RT colony-forming choanoflagellate.";
RL J. Bacteriol. 193:1485-1486(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAZ79933.1}.
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DR EMBL; AAXU02000001; EAZ79933.1; -; Genomic_DNA.
DR EMBL; AAXU02000001; EFQ79253.1; -; Genomic_DNA.
DR RefSeq; WP_008201692.1; NZ_CM001023.1.
DR AlphaFoldDB; A3I0D7; -.
DR STRING; 388413.ALPR1_14929; -.
DR eggNOG; COG3547; Bacteria.
DR HOGENOM; CLU_036902_1_2_10; -.
DR OrthoDB; 964423at2; -.
DR Proteomes; UP000003919; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR InterPro; IPR002525; Transp_IS110-like_N.
DR InterPro; IPR047650; Transpos_IS110.
DR InterPro; IPR003346; Transposase_20.
DR NCBIfam; NF033542; transpos_IS110; 1.
DR PANTHER; PTHR33055; TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1111A; 1.
DR PANTHER; PTHR33055:SF3; TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1111A; 1.
DR Pfam; PF01548; DEDD_Tnp_IS110; 1.
DR Pfam; PF02371; Transposase_20; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000003919};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 11..156
FT /note="Transposase IS110-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01548"
FT DOMAIN 227..312
FT /note="Transposase IS116/IS110/IS902 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02371"
SQ SEQUENCE 351 AA; 41042 MW; 89A82D1BE1535F9F CRC64;
MDTEVSPKLF IGIDVHKRQW SVCIITANCH HKTFSQAPDP KALKSYLDKF FPKYQIICCY
EACKFGFWIY RDLKSFGYEC LVINPADLPT TNKESSEKTD PVDSRKMAKA LRAGLLRGIH
VPTLETEGDR QLFRYRKRLW ADLVRVKNRI KDKLLQNGIE TPPKYDNPYW TKDFLDWLAI
VELPSDSSRL VMDLLLDQFE FTYRHFLKVS ISVRALQRKS KYKANSKLLR QIPGIGPLTT
VQLLTEIEDV NRFRNFKHFN SYIGLKPMVH SSGESDRKGY MTYRHHQGLR SSLIECAWTT
VQRDPVMLNR YEELLQRHTG KRAIVIIARK LLSRIYHVLK TGEPYQVGYS T
//