ID A3QB47_SHELP Unreviewed; 301 AA.
AC A3QB47;
DT 17-APR-2007, integrated into UniProtKB/TrEMBL.
DT 17-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 105.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABO22695.1};
GN OrderedLocusNames=Shew_0823 {ECO:0000313|EMBL:ABO22695.1};
OS Shewanella loihica (strain ATCC BAA-1088 / PV-4).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=323850 {ECO:0000313|EMBL:ABO22695.1, ECO:0000313|Proteomes:UP000001558};
RN [1] {ECO:0000313|EMBL:ABO22695.1, ECO:0000313|Proteomes:UP000001558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1088 / PV-4 {ECO:0000313|Proteomes:UP000001558};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G.,
RA Fredrickson J., Tiedje J., Richardson P.;
RT "Complete sequence of Shewanella loihica PV-4.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000606; ABO22695.1; -; Genomic_DNA.
DR RefSeq; WP_011864629.1; NC_009092.1.
DR AlphaFoldDB; A3QB47; -.
DR STRING; 323850.Shew_0823; -.
DR KEGG; slo:Shew_0823; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_2_6; -.
DR OrthoDB; 9786526at2; -.
DR Proteomes; UP000001558; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000001558}.
FT DOMAIN 1..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 301 AA; 34076 MW; 1400D188D68A8008 CRC64;
MDKISAIRSF VEVASCGSFT QAAEQLGLSR LQVSRHIQEV ERWLGLRLLH RTTRSVSLSV
QGEEAFIYCQ KILDEVAALQ NRAQRHRQEL VGSIRIASPI GLGQALLFDA VDDFTREHPE
VKVQLQLSDE MVQLVDERVD IALRYTQQPD ESLIARRLMH IDSVLCASPD YLAGHEPITS
LDDITAHNCL LHASQTRWLF VKDNQNIEKK ISGNLQANDM GVLIKAAMRG KGLIHLPCDL
ANAHLASGEL VELLPEYHLP GKTLWAVYLS RSYQQHLIRH FIDFLAERWQ QDILKQPAPA
R
//
