ID A3WSW5_9BRAD Unreviewed; 203 AA.
AC A3WSW5;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE SubName: Full=RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EAQ36887.1};
DE EC=2.7.7.6 {ECO:0000313|EMBL:EAQ36887.1};
GN ORFNames=NB311A_07053 {ECO:0000313|EMBL:EAQ36887.1};
OS Nitrobacter sp. Nb-311A.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Nitrobacter.
OX NCBI_TaxID=314253 {ECO:0000313|EMBL:EAQ36887.1, ECO:0000313|Proteomes:UP000003725};
RN [1] {ECO:0000313|EMBL:EAQ36887.1, ECO:0000313|Proteomes:UP000003725}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nb-311A {ECO:0000313|EMBL:EAQ36887.1,
RC ECO:0000313|Proteomes:UP000003725};
RA Waterbury J., Ferriera S., Johnson J., Kravitz S., Halpern A.,
RA Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R., Venter J.C.;
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAQ36887.1}.
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DR EMBL; AAMY01000002; EAQ36887.1; -; Genomic_DNA.
DR RefSeq; WP_009796366.1; NZ_AAMY01000002.1.
DR AlphaFoldDB; A3WSW5; -.
DR STRING; 314253.NB311A_07053; -.
DR HOGENOM; CLU_047691_3_0_5; -.
DR OrthoDB; 9803470at2; -.
DR Proteomes; UP000003725; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF63; BLR3042 PROTEIN; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotidyltransferase {ECO:0000313|EMBL:EAQ36887.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000003725};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000313|EMBL:EAQ36887.1}.
FT DOMAIN 41..107
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 142..189
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
SQ SEQUENCE 203 AA; 22812 MW; C556613FF070CAA8 CRC64;
MQNVIAINAA ACQGIIAAQA TTDQMLLERI AHGDRAAMHT LYLRHNVRVY RFVLRSLRDA
TAAEDIVSQV FLDVWRTADQ FEGRSRVSTW LLSIARFKTL TAMRQRRHED IDQESVREIA
DGADTPETSL DRSNVSEILR TCIAQLSPAH REIIHLVYYH EKTVEEAGEI IGIPPSTVKT
RMFYARKQLA ALLKVAGLAT LAA
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