ID A3XA41_9RHOB Unreviewed; 221 AA.
AC A3XA41;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=DNA-binding protein, putative {ECO:0000313|EMBL:EAQ45312.1};
GN ORFNames=MED193_01120 {ECO:0000313|EMBL:EAQ45312.1};
OS Roseobacter sp. MED193.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Roseobacter.
OX NCBI_TaxID=314262 {ECO:0000313|EMBL:EAQ45312.1, ECO:0000313|Proteomes:UP000005943};
RN [1] {ECO:0000313|EMBL:EAQ45312.1, ECO:0000313|Proteomes:UP000005943}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MED193 {ECO:0000313|EMBL:EAQ45312.1,
RC ECO:0000313|Proteomes:UP000005943};
RA Pinhassi J., Pedros-Alio C., Ferriera S., Johnson J., Kravitz S.,
RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R.,
RA Venter J.C.;
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAQ45312.1}.
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DR EMBL; AANB01000005; EAQ45312.1; -; Genomic_DNA.
DR RefSeq; WP_009807617.1; NZ_AANB01000005.1.
DR AlphaFoldDB; A3XA41; -.
DR STRING; 314262.MED193_01120; -.
DR HOGENOM; CLU_085376_3_1_5; -.
DR OrthoDB; 9805356at2; -.
DR Proteomes; UP000005943; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd02209; cupin_XRE_C; 1.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR46797:SF19; BLR5530 PROTEIN; 1.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:EAQ45312.1}.
FT DOMAIN 41..95
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 221 AA; 24205 MW; 91B368F7FAA2C112 CRC64;
MAKNSPKTST ASAGRAALSQ NPHAVREVRE KNLEVAIGRQ VRELRKRQRL TGANLAELTG
LSVGMLSKIE NGVISPSLNT LQVLADALRV PLMQLFSGFE EARGAMHVKA GQGAEIERAG
TRAGHQYQLL GHIGSNNSGV VIEPYLIELT TESDRFPTFQ HEGLELLYML EGAVDYRHGD
QIYHLEPGDS LLFDADAPHG PENLVSLPAR YLSVITYPQQ R
//