ID   A3XH98_LEEBM            Unreviewed;       711 AA.
AC   A3XH98;
DT   03-APR-2007, integrated into UniProtKB/TrEMBL.
DT   03-APR-2007, sequence version 1.
DT   27-MAR-2024, entry version 70.
DE   SubName: Full=Putative RNA binding protein with S1 RNA-binding domain {ECO:0000313|EMBL:EAQ51346.1};
GN   ORFNames=MED217_17425 {ECO:0000313|EMBL:EAQ51346.1};
OS   Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / KCTC 22103 /
OS   MED217) (Flavobacterium sp. (strain MED217)).
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Leeuwenhoekiella.
OX   NCBI_TaxID=398720 {ECO:0000313|EMBL:EAQ51346.1, ECO:0000313|Proteomes:UP000001601};
RN   [1] {ECO:0000313|EMBL:EAQ51346.1, ECO:0000313|Proteomes:UP000001601}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MED217 {ECO:0000313|EMBL:EAQ51346.1,
RC   ECO:0000313|Proteomes:UP000001601};
RX   PubMed=17215843; DOI=10.1038/nature05381;
RA   Gomez-Consarnau L., Gonzalez J.M., Coll-Llado M., Gourdon P., Pascher T.,
RA   Neutze R., Pedros-Alio C., Pinhassi J.;
RT   "Light stimulates growth of proteorhodopsin-containing marine
RT   Flavobacteria.";
RL   Nature 445:210-213(2007).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EAQ51346.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AANC01000001; EAQ51346.1; -; Genomic_DNA.
DR   RefSeq; WP_009781825.1; NZ_CH672395.1.
DR   AlphaFoldDB; A3XH98; -.
DR   STRING; 398720.MED217_17425; -.
DR   eggNOG; COG2183; Bacteria.
DR   HOGENOM; CLU_009833_0_2_10; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000001601; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001601}.
FT   DOMAIN          638..707
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   711 AA;  79549 MW;  788B391ADA04C0BA CRC64;
     MTALLSYLKS STNLPETGIK NVLQLLDEDA TIPFIARYRK ERTGNLDEVQ LGEIVKYKEQ
     FEALEKRKVT ILKALEEQEV LTVELQKQIE NTTDATALED LYLPYKKTRK TKADTAREQG
     LEPLAKIIMA QNTRDLEQAA GRFLNNEVAS IEEALEGARH IIAEWVNERS DVRNYLRNQI
     ERYAQITSRV VKSKKDDEKA LKYKDYFDWE EALNRIPSHR FLALSRAADE GFVRLKLDID
     TCRALAHIAN RMIKSRGDCA EHIELAIADA YKRLLFPALS NEALSTAKEK ADAEAISVFA
     KNLRQLLLGS PLGEKRILAI DPGFRTGCKV VCLDENGGLQ HNETIYPHPP KNDTKGAMRK
     ISFLVDAHKI EAIAIGNGTA SRETEQFIKR MQFNRDLEVF VVSEAGASIY SASKIARDEF
     PNYDVTVRGA VSIGRRLADP LAELVKIDAK SIGVGQYQHD VDQTKLKNEL DRVVESCVNT
     VGVNINTASI PLLSYVSGIG PKLAENIVTY RDENGAFASR KEILNVPRLG AKAYEQAAGF
     LRIKNAENPL DDSAVHPERY ALVEKMATNL KLSVAELVGN KTVIKELSLE DYVSDEVGEL
     TLKDILDELE KPSLDPREPS KAFTFNQNIH KIEDLEPDQL LPGIVNNITN FGAFVDIGIK
     ESGLIHISNL ADGYVSDVNA HVSLQEQVVV KVLEVDIKRK RIQLKLHKLN A
//