ID A3XPI6_LEEBM Unreviewed; 508 AA.
AC A3XPI6;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=RNA polymerase sigma-70 region 4 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=MED217_08290 {ECO:0000313|EMBL:EAQ48531.1};
OS Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / KCTC 22103 /
OS MED217) (Flavobacterium sp. (strain MED217)).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Leeuwenhoekiella.
OX NCBI_TaxID=398720 {ECO:0000313|EMBL:EAQ48531.1, ECO:0000313|Proteomes:UP000001601};
RN [1] {ECO:0000313|EMBL:EAQ48531.1, ECO:0000313|Proteomes:UP000001601}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MED217 {ECO:0000313|EMBL:EAQ48531.1,
RC ECO:0000313|Proteomes:UP000001601};
RX PubMed=17215843; DOI=10.1038/nature05381;
RA Gomez-Consarnau L., Gonzalez J.M., Coll-Llado M., Gourdon P., Pascher T.,
RA Neutze R., Pedros-Alio C., Pinhassi J.;
RT "Light stimulates growth of proteorhodopsin-containing marine
RT Flavobacteria.";
RL Nature 445:210-213(2007).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAQ48531.1}.
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DR EMBL; AANC01000007; EAQ48531.1; -; Genomic_DNA.
DR AlphaFoldDB; A3XPI6; -.
DR STRING; 398720.MED217_08290; -.
DR eggNOG; ENOG502ZABG; Bacteria.
DR HOGENOM; CLU_536165_0_0_10; -.
DR Proteomes; UP000001601; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 6.10.140.530; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005114; Helicase_assoc.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF03457; HA; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001601}.
FT DOMAIN 8..37
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
FT DOMAIN 365..424
FT /note="Helicase-associated"
FT /evidence="ECO:0000259|Pfam:PF03457"
SQ SEQUENCE 508 AA; 60699 MW; 803B6445C633B2CC CRC64;
MKLFNNQKEL TLDEIAEQVD LSRERVRQIR KIGLESLFNK LLFISNFNDD LFQKYSIDVE
SMYIEIDTDI LNKINQSNNT NFSREFITFI LSAYLKDSFS LVGNYEDVLQ PKYFNSRNRH
NWNNFYLIKK ELSLEFDFTS FTNDISKRLS DRIEESYSFN FKSYLSKFLL NNYIDFLELL
FPICEKIINE EFEIYLDLEE NINFKRNTTR QAHEYAFEAL EHLGKPSKVK EIFEKVIELH
PNYDTEEVKI RVSMKRKNGF VPIGRKSVFG LKKWESELDN FKGGTIRDIA EEYLMQYSVP
KHISDITEHV LKYRPKSNQY SILQNLKLDE SGLYIFFKGS HIGLTTKKYE SDFKKISEVQ
KTDKKTWEER FEMLQNFVLT EKRLPFSNGV PQKEIKLYRW LCVQKSKQNK GKLAKNKLEK
LNSLLVKYPS VNGRRRLNSN EKYQELISFV SNNRRLPSAN KDGEENLYQF FYKQRKLFDK
NELGSKEENK FIEVAKLLQN IKYENKRN
//
