ID A4CH69_ROBBH Unreviewed; 457 AA.
AC A4CH69;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE SubName: Full=Possible ribosomal protein S6 modification protein {ECO:0000313|EMBL:EAR16277.1};
GN OrderedLocusNames=RB2501_05245 {ECO:0000313|EMBL:EAR16277.1};
OS Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Robiginitalea.
OX NCBI_TaxID=313596 {ECO:0000313|EMBL:EAR16277.1, ECO:0000313|Proteomes:UP000009049};
RN [1] {ECO:0000313|EMBL:EAR16277.1, ECO:0000313|Proteomes:UP000009049}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-864 / HTCC2501 / KCTC 12146
RC {ECO:0000313|Proteomes:UP000009049};
RX PubMed=19767438; DOI=10.1128/JB.01191-09;
RA Oh H.M., Giovannoni S.J., Lee K., Ferriera S., Johnson J., Cho J.C.;
RT "Complete genome sequence of Robiginitalea biformata HTCC2501.";
RL J. Bacteriol. 191:7144-7145(2009).
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DR EMBL; CP001712; EAR16277.1; -; Genomic_DNA.
DR RefSeq; WP_015753034.1; NC_013222.1.
DR AlphaFoldDB; A4CH69; -.
DR STRING; 313596.RB2501_05245; -.
DR KEGG; rbi:RB2501_05245; -.
DR eggNOG; COG0189; Bacteria.
DR eggNOG; COG4067; Bacteria.
DR HOGENOM; CLU_045509_1_0_10; -.
DR OrthoDB; 3865600at2; -.
DR Proteomes; UP000009049; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR GO; GO:0036211; P:protein modification process; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.20; -; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.30.1490.20; ATP-grasp fold, A domain; 1.
DR Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 1.
DR InterPro; IPR011761; ATP-grasp.
DR InterPro; IPR013651; ATP-grasp_RimK-type.
DR InterPro; IPR013815; ATP_grasp_subdomain_1.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR008503; Put_Zn_protease.
DR InterPro; IPR041107; Rimk_N.
DR InterPro; IPR004666; Rp_bS6_RimK/Lys_biosynth_LsyX.
DR NCBIfam; TIGR00768; rimK_fam; 1.
DR PANTHER; PTHR21621; RIBOSOMAL PROTEIN S6 MODIFICATION PROTEIN; 1.
DR PANTHER; PTHR21621:SF7; RIBOSOMAL PROTEIN S6--L-GLUTAMATE LIGASE; 1.
DR Pfam; PF08443; RimK; 1.
DR Pfam; PF18030; Rimk_N; 1.
DR Pfam; PF05618; Zn_protease; 1.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 1.
DR PROSITE; PS50975; ATP_GRASP; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000009049}.
FT DOMAIN 266..449
FT /note="ATP-grasp"
FT /evidence="ECO:0000259|PROSITE:PS50975"
SQ SEQUENCE 457 AA; 50532 MW; B4D7B2BD860B7649 CRC64;
MTQLPTLGSE EWCVFDDLGI PAIKARVDSG AKTSSMQATN IKVVMKHGEE WVHFEVHPLQ
DTRSITIPCE AKLVDRRYVK SSSGITEERL VIRTPVRLGE DTFEIEVTLA SRDTMEYRML
LGREALSGRY LVNPAASFSQ QEISDAELEG LYKPHRPSRS GLKIALLASN PQLYSNKRIM
EAAQGRGHEI VFLNVELAYM KLDARSPEIR YRGGNILNEF DAIIPRIKPA VTFYGCALIR
QFDNLGVYCL NSAEAITQSR DKLFASQLFS RHDIHIPITG FAKSPNDTRD LIKMVNGAPL
IIKLLESTQG KGVVLAETNK AAESVINAFK SVQTNILVQE FIKEANGQDI RCFVINNKVV
ASMQRQAEKG EFRANIHQGG SASPVKITSE ERKLAIKAAK VLNLAVAGVD IIRSNKGPLL
LEVNSSPGLE GIENATGKDI ADSMIRAIEK KLNYQPA
//
