ID A4RW58_OSTLU Unreviewed; 727 AA.
AC A4RW58;
DT 15-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 15-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=OSTLU_31221 {ECO:0000313|EMBL:ABO95560.1};
OS Ostreococcus lucimarinus (strain CCE9901).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Ostreococcus.
OX NCBI_TaxID=436017 {ECO:0000313|EMBL:ABO95560.1, ECO:0000313|Proteomes:UP000001568};
RN [1] {ECO:0000313|EMBL:ABO95560.1, ECO:0000313|Proteomes:UP000001568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCE9901 {ECO:0000313|EMBL:ABO95560.1,
RC ECO:0000313|Proteomes:UP000001568};
RX PubMed=17460045; DOI=10.1073/pnas.0611046104;
RA Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N.,
RA Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R.,
RA Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K.,
RA Manuell A., Tai V., Vallon O., Piganeau G., Jancek S., Heijde M.,
RA Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I.,
RA Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D.,
RA Van de Peer Y., Moreau H., Grigoriev I.V.;
RT "The tiny eukaryote Ostreococcus provides genomic insights into the paradox
RT of plankton speciation.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007).
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DR EMBL; CP000584; ABO95560.1; -; Genomic_DNA.
DR RefSeq; XP_001417267.1; XM_001417230.1.
DR AlphaFoldDB; A4RW58; -.
DR STRING; 436017.A4RW58; -.
DR EnsemblPlants; ABO95560; ABO95560; OSTLU_31221.
DR GeneID; 5001336; -.
DR Gramene; ABO95560; ABO95560; OSTLU_31221.
DR KEGG; olu:OSTLU_31221; -.
DR eggNOG; KOG0128; Eukaryota.
DR HOGENOM; CLU_381030_0_0_1; -.
DR OMA; GFAYVEC; -.
DR OrthoDB; 2879516at2759; -.
DR Proteomes; UP000001568; Chromosome 4.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR17204:SF25; EMBRYO DEFECTIVE 140; 1.
DR PANTHER; PTHR17204; PRE-MRNA PROCESSING PROTEIN PRP39-RELATED; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00386; HAT; 4.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001568};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 576..650
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 516..537
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..694
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 518..537
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 646..660
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 727 AA; 80567 MW; 13187BEF81D25678 CRC64;
MTLEQELESD SWRDYAKAGR LIDLLRAANL RERCRTARER YNEAFAMDEA RWSAWIQDEL
ANKTTGTKRE RHTRCDELFA RAIEECGRTS VRLHMGRSRN AMELEADESD RRALYETATA
GPGMNFNDGH LIWQAYRAFE LSWAASETQK VRVKALYLRQ LKIPQAQSQA TLEAAKTWAA
DAGLHNADAA FHEAYAVGNA AKVLREPYEA RLLAVTSSHE GDAKLLRAYA TYIDFEMASG
SPDRVVHLYE RALSSLPYVA ELWRDYVLYV WSISFKSAEA ASRTLMLRAV RMCPSSVLWK
SVLELESSYD LYTHALRTKF RDPNDYGAVL TKVLTQCVRL DDWAKASGCV TFGFEQMAKD
YSPNIMAAAA IHVLKELVDY ALMKDHKTTV ASFIDAVFAQ LAERAPFKTA AEFVILRTDT
SRLIKKTQKE VLDLYDVALQ RGTVEPVGLS KKTVDEETRR LAGTAMLLKA KARYLSTFAP
KKYDDFNEKT NAMAAVRRYE LKLACERLAA NAAAKERMKS GGSRRERAAA RRAGAEPIPR
KRTREIPEGG DKTDMNLAGM DHDARVKTLF PTRDTQTAFV KNLSWDVTDA ELMEFFTGAV
SCRIVKDKAT GRSRGIAYVD FGEEAALNAA IMRSGEALKG RLVDIAKSRP PGDDGPDGRG
GRGGGRGSRG GGRGGGRAAP SVASGRGRGG LGLMPRAITV TRTDNGEGAQ AKTNADFRAM
FVKGSSQ
//