ID A4RY05_OSTLU Unreviewed; 319 AA.
AC A4RY05;
DT 15-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 15-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=OSTLU_38809 {ECO:0000313|EMBL:ABO96380.1};
OS Ostreococcus lucimarinus (strain CCE9901).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Ostreococcus.
OX NCBI_TaxID=436017 {ECO:0000313|EMBL:ABO96380.1, ECO:0000313|Proteomes:UP000001568};
RN [1] {ECO:0000313|EMBL:ABO96380.1, ECO:0000313|Proteomes:UP000001568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCE9901 {ECO:0000313|EMBL:ABO96380.1,
RC ECO:0000313|Proteomes:UP000001568};
RX PubMed=17460045; DOI=10.1073/pnas.0611046104;
RA Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N.,
RA Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R.,
RA Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K.,
RA Manuell A., Tai V., Vallon O., Piganeau G., Jancek S., Heijde M.,
RA Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I.,
RA Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D.,
RA Van de Peer Y., Moreau H., Grigoriev I.V.;
RT "The tiny eukaryote Ostreococcus provides genomic insights into the paradox
RT of plankton speciation.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SF3B4 family.
CC {ECO:0000256|ARBA:ARBA00008363}.
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DR EMBL; CP000585; ABO96380.1; -; Genomic_DNA.
DR RefSeq; XP_001418087.1; XM_001418050.1.
DR AlphaFoldDB; A4RY05; -.
DR STRING; 436017.A4RY05; -.
DR EnsemblPlants; ABO96380; ABO96380; OSTLU_38809.
DR GeneID; 5001797; -.
DR Gramene; ABO96380; ABO96380; OSTLU_38809.
DR KEGG; olu:OSTLU_38809; -.
DR eggNOG; KOG0131; Eukaryota.
DR HOGENOM; CLU_012062_21_2_1; -.
DR OMA; AMVYEIM; -.
DR OrthoDB; 21912at2759; -.
DR Proteomes; UP000001568; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0070063; F:RNA polymerase binding; IEA:EnsemblPlants.
DR GO; GO:0010075; P:regulation of meristem growth; IEA:EnsemblPlants.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:EnsemblPlants.
DR CDD; cd12334; RRM1_SF3B4; 1.
DR CDD; cd12335; RRM2_SF3B4; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034158; SF3B4_RRM1.
DR InterPro; IPR034159; SF3B4_RRM2.
DR PANTHER; PTHR48030; SPLICING FACTOR 3B SUBUNIT 4; 1.
DR PANTHER; PTHR48030:SF3; SPLICING FACTOR 3B, SUBUNIT 4; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 2.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001568};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 29..107
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 115..194
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 287..319
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 319 AA; 33758 MW; 356A544BEED4A2C9 CRC64;
MAPIAGGRIT AGAGVNLLGQ HGADRNAEAT VYVGNLDPQV TEEVLWELFL QAGPVTNVYV
PKDRVTSTHQ GYGFVEFRNE EDAEYGIKIL NMVKLFGKPI KVNKSVGDRR DEVGANLFIG
NLDPDIDEKL LYDTFSAFGV VINTPKIMRD PDNGASKGFG FVAYDSFEAS DAAIEAMNGQ
FLCNKQINVQ YAYKKDSKGE RHGSQAERLL AQSIERPTMV RPHTLFSAGP SSTPAAMGGM
MGLPPPPPGM VGMPPPPPGM MGGIPPPPMM GGFAPVGGFA MPPPGVAPPP GTMNAPPPPG
MMNVPPPPGM MNVPPPPPQ
//
