ID A4XU39_PSEMY Unreviewed; 905 AA.
AC A4XU39;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 91.
DE SubName: Full=Assimilatory nitrate reductase (NADH) alpha subunit apoprotein {ECO:0000313|EMBL:ABP84855.1};
DE EC=1.7.1.1 {ECO:0000313|EMBL:ABP84855.1};
GN OrderedLocusNames=Pmen_2094 {ECO:0000313|EMBL:ABP84855.1};
OS Pseudomonas mendocina (strain ymp).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=399739 {ECO:0000313|EMBL:ABP84855.1};
RN [1] {ECO:0000313|EMBL:ABP84855.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ymp {ECO:0000313|EMBL:ABP84855.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C.,
RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.,
RA Hersman L., Dubois J., Maurice P., Richardson P.;
RT "Complete sequence of Pseudomonas mendocina ymp.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mo-bis(molybdopterin guanine dinucleotide);
CC Xref=ChEBI:CHEBI:60539; Evidence={ECO:0000256|ARBA:ARBA00001942};
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
CC -!- PATHWAY: Nitrogen metabolism. {ECO:0000256|ARBA:ARBA00004909}.
CC -!- SIMILARITY: Belongs to the prokaryotic molybdopterin-containing
CC oxidoreductase family. NasA/NapA/NarB subfamily.
CC {ECO:0000256|ARBA:ARBA00008747}.
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DR EMBL; CP000680; ABP84855.1; -; Genomic_DNA.
DR AlphaFoldDB; A4XU39; -.
DR STRING; 399739.Pmen_2094; -.
DR KEGG; pmy:Pmen_2094; -.
DR PATRIC; fig|399739.8.peg.2124; -.
DR eggNOG; COG0243; Bacteria.
DR HOGENOM; CLU_000422_13_1_6; -.
DR OrthoDB; 9816402at2; -.
DR GO; GO:1990204; C:oxidoreductase complex; IEA:UniProt.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043546; F:molybdopterin cofactor binding; IEA:InterPro.
DR GO; GO:0009703; F:nitrate reductase (NADH) activity; IEA:UniProtKB-EC.
DR GO; GO:0045333; P:cellular respiration; IEA:UniProt.
DR GO; GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW.
DR CDD; cd02791; MopB_CT_Nitrate-R-NapA-like; 1.
DR CDD; cd02754; MopB_Nitrate-R-NapA-like; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.40.50.740; -; 1.
DR Gene3D; 2.20.25.90; ADC-like domains; 1.
DR Gene3D; 1.10.10.1100; BFD-like [2Fe-2S]-binding domain; 1.
DR Gene3D; 3.40.228.10; Dimethylsulfoxide Reductase, domain 2; 1.
DR InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR InterPro; IPR007419; BFD-like_2Fe2S-bd_dom.
DR InterPro; IPR041854; BFD-like_2Fe2S-bd_dom_sf.
DR InterPro; IPR041957; CT_Nitrate-R-NapA-like.
DR InterPro; IPR006657; MoPterin_dinucl-bd_dom.
DR InterPro; IPR006656; Mopterin_OxRdtase.
DR InterPro; IPR006963; Mopterin_OxRdtase_4Fe-4S_dom.
DR InterPro; IPR006655; Mopterin_OxRdtase_prok_CS.
DR InterPro; IPR027467; MopterinOxRdtase_cofactor_BS.
DR PANTHER; PTHR43105:SF9; NITRATE REDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G15190)-RELATED; 1.
DR PANTHER; PTHR43105; RESPIRATORY NITRATE REDUCTASE; 1.
DR Pfam; PF04324; Fer2_BFD; 1.
DR Pfam; PF04879; Molybdop_Fe4S4; 1.
DR Pfam; PF00384; Molybdopterin; 1.
DR Pfam; PF01568; Molydop_binding; 1.
DR SMART; SM00926; Molybdop_Fe4S4; 1.
DR SUPFAM; SSF50692; ADC-like; 1.
DR SUPFAM; SSF53706; Formate dehydrogenase/DMSO reductase, domains 1-3; 1.
DR PROSITE; PS51669; 4FE4S_MOW_BIS_MGD; 1.
DR PROSITE; PS00551; MOLYBDOPTERIN_PROK_1; 1.
DR PROSITE; PS00490; MOLYBDOPTERIN_PROK_2; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Molybdenum {ECO:0000256|ARBA:ARBA00022505};
KW Nitrate assimilation {ECO:0000256|ARBA:ARBA00023063};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002,
KW ECO:0000313|EMBL:ABP84855.1}.
FT DOMAIN 5..61
FT /note="4Fe-4S Mo/W bis-MGD-type"
FT /evidence="ECO:0000259|PROSITE:PS51669"
SQ SEQUENCE 905 AA; 98597 MW; EAB27B3275603DB3 CRC64;
MPTQSQITAS TCCYCGVGCG VLIEHDGEKI LGVAGDPSHP ANFGKLCSKG STLHLTGDLD
ARALHPELRL GKGLARSRTD WDSALDHAAA VFAETIREHG PDSVAFYISG QLLTEDYYAF
NKLARALVGT NNIDSNSRLC MSSAVVGYKR SLGADAPPCS YEDIEQSDCL LIAGSNMAYA
HPVLFRRLEE AKARRPEMQI IVVDPRRTDT CELADLHLAI LPGTDVALFH GILHILLWEG
WVDRRYIDAH TEGFAALKNL VRDYSPAATA DICGISLDAL QRCAELIGRA PSFLSLWCMG
LNQSSAGSAK NSALINLHLA TGQIGKPGAG PFSLTGQPNA MGGRETGSLS NLLPGHREAG
NAEHRAEVAA YWGVDALPET PGLSAIELFD AVHDGRIKAL WIACTNPAQS LPNQNKVHEA
LAACPFVVVQ EAFFTTETCR YADLLLPAAS WGEKEGTVTN SERRVSHVRR AVPAPAEARS
DWSITCDFAR RLETLLRPGL PSLFDFTSSE ALFEEYKHLT AERDLDLSGL SYALLDDQGP
QQWPFAPGAR QGTARLYADG LFPTASGRAQ FHADPYRAPK EKREARYSLT LNTGRLRDQW
HGMSRTGTAA RLFGHVEAAV LGLHPDELRR RRLQDGDLVK LRSRRGSLIL PVQADESVRP
GQAWLPMHWG DRFLKGLGTN VLTQPAFDPL SKQPELKHAG VEVDKVELPW QLFALVEGEV
QSRFEALRPL FEEFAYASLT PTGRERPALL IRAASAVAPQ PELLAQIDRL LRLNQGPVLA
YDDPRRAVGK RVRIEDGRIV STRLAGETAA SEWLRSLWLD GQADADLRRW LLAPVSAPPG
NATATTRGKT LCNCLNVSES AVCAGIERGL DLNGLKQELK CGTSCGSCVP EIKRLLAQQP
MATQA
//
