ID A4Y0U5_PSEMY Unreviewed; 263 AA.
AC A4Y0U5;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 108.
DE SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABP87211.1};
GN OrderedLocusNames=Pmen_4464 {ECO:0000313|EMBL:ABP87211.1};
OS Pseudomonas mendocina (strain ymp).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=399739 {ECO:0000313|EMBL:ABP87211.1};
RN [1] {ECO:0000313|EMBL:ABP87211.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ymp {ECO:0000313|EMBL:ABP87211.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C.,
RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.,
RA Hersman L., Dubois J., Maurice P., Richardson P.;
RT "Complete sequence of Pseudomonas mendocina ymp.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000680; ABP87211.1; -; Genomic_DNA.
DR AlphaFoldDB; A4Y0U5; -.
DR STRING; 399739.Pmen_4464; -.
DR KEGG; pmy:Pmen_4464; -.
DR PATRIC; fig|399739.8.peg.4527; -.
DR eggNOG; COG2169; Bacteria.
DR HOGENOM; CLU_000445_87_4_6; -.
DR OrthoDB; 9804543at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009893; P:positive regulation of metabolic process; IEA:UniProt.
DR CDD; cd06124; cupin_NimR-like_N; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR11019; HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR; 1.
DR PANTHER; PTHR11019:SF159; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 166..263
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 263 AA; 29426 MW; 21C8DDE12AF5844A CRC64;
MSPNRHPDTV HRSLPELPSL PRPLYGRVES LTNRALTFRH THPWVQLSYA IAGVLEVQTA
GARFVAPPQR AVWVPAGVEH RVFSSPRTEM RSLYIDGSAV PWGPDECRVL AVSPLLRELI
RRFSDLPIEY DEQGAPGRLA AVLLDELQAA PAVALMLPLP QDARLRAVCQ GLEDARLRQL
GLGEWGERLG VSEKTLSRLF LRETGLSFRA WRQRQRLLDA LTPLEQGERV TDVALACGYD
SLSAFIAAFR RQFGATPGEF FRE
//
