ID A4YBQ4_SHEPC Unreviewed; 720 AA.
AC A4YBQ4;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=Ornithine decarboxylase {ECO:0000313|EMBL:ABP77387.1};
DE EC=4.1.1.17 {ECO:0000313|EMBL:ABP77387.1};
GN OrderedLocusNames=Sputcn32_3679 {ECO:0000313|EMBL:ABP77387.1};
OS Shewanella putrefaciens (strain CN-32 / ATCC BAA-453).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=319224 {ECO:0000313|EMBL:ABP77387.1};
RN [1] {ECO:0000313|EMBL:ABP77387.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CN-32 {ECO:0000313|EMBL:ABP77387.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J.,
RA Tiedje J., Richardson P.;
RT "Complete sequence of Shewanella putrefaciens CN-32.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-I family.
CC {ECO:0000256|ARBA:ARBA00010671}.
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DR EMBL; CP000681; ABP77387.1; -; Genomic_DNA.
DR AlphaFoldDB; A4YBQ4; -.
DR STRING; 319224.Sputcn32_3679; -.
DR KEGG; spc:Sputcn32_3679; -.
DR eggNOG; COG1982; Bacteria.
DR HOGENOM; CLU_014292_3_0_6; -.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0004586; F:ornithine decarboxylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006520; P:amino acid metabolic process; IEA:InterPro.
DR CDD; cd00615; Orn_deC_like; 1.
DR Gene3D; 3.40.50.220; -; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.90.100.10; Orn/Lys/Arg decarboxylase, C-terminal domain; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR027568; ODC_inducible.
DR InterPro; IPR005308; OKR_de-COase_N.
DR InterPro; IPR011193; Orn/lys/arg_de-COase.
DR InterPro; IPR000310; Orn/Lys/Arg_deCO2ase_major_dom.
DR InterPro; IPR027464; Ornithine_deCO2ase_N.
DR InterPro; IPR008286; Prn/Lys/Arg_de-COase_C.
DR InterPro; IPR036633; Prn/Lys/Arg_de-COase_C_sf.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR NCBIfam; TIGR04301; ODC_inducible; 1.
DR PANTHER; PTHR45229:SF3; BIODEGRADATIVE ARGININE DECARBOXYLASE; 1.
DR PANTHER; PTHR45229; CONSTITUTIVE ORNITHINE DECARBOXYLASE; 1.
DR Pfam; PF01276; OKR_DC_1; 1.
DR Pfam; PF03711; OKR_DC_1_C; 1.
DR Pfam; PF03709; OKR_DC_1_N; 1.
DR PIRSF; PIRSF009393; Orn_decarb; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF55904; Ornithine decarboxylase C-terminal domain; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR PROSITE; PS00703; OKR_DC_1; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000313|EMBL:ABP77387.1};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW ECO:0000256|PIRSR:PIRSR009393-1}.
FT DOMAIN 350..364
FT /note="Orn/Lys/Arg decarboxylases family 1 pyridoxal-P
FT attachment site"
FT /evidence="ECO:0000259|PROSITE:PS00703"
FT MOD_RES 355
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR009393-1"
SQ SEQUENCE 720 AA; 81068 MW; 3437675C745740B2 CRC64;
MKSLKVAASL SVRSCFDIDR EVVNVLTTDF CDVGAAVVSV DDVRNGIVEK IKNTGLKLPI
FVSVCCEETF PDDVCSSITG VFELCGDNTD FYGKQVETAV NKYEQALLPP FFGTLKKYVE
MGNSTFACPG HQGGQFFRKH PVGRQFFDFF GETIFRADMC NADVKLGDLL IHEGAPLDAQ
KYAAKVFNAD KTYFVLNGTS SSNKVATNAL LAKGDLVLFD RNNHKSNHHG ALIQAGATPI
YLETARNPFG FIGGIDAHCF QESYLREQIR EVAPERADEK RPFRLAIIQL GTYDGTIYNA
RQVVDRIGHL CDYILFDSAW VGYEQFIPMM NDCSPLLLEL TPEDPGIIVT QSVHKQQAGF
SQTSQIHKKD KHIKGQARYC NHKRFNNAFM MHASTSPFYP LFAALDVNAK MHEGASGRYL
WREAVKAGIE ARKLLLKKCK YIKPFVPTMI DGRLWQEYET EQMADDLRFF EFEPGQKWHS
FDGYEKGQYF VDPCKFLLTT PGIDAETGKY TEFGIPATIL ANFLRENNII PEKCDLNSIL
FLMTPAEDMA KMQHLVSQIS RFEKLVDEDA PLSEVLPNVY NANKARYKDY TIRQLCQEMH
NLYVSHDVKQ LQKEMFRKAH FPTKVMDPQE ANLEFIRGKV ELVPLSQIEG RIAAEGALPY
PPGVLCMVPG EIWGGAVQRY FLALEEGINL LPGFSPELQG VYLENTAEGK IQALGYVLAK
//
