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Database: UniProt
Entry: A4ZHK6_CAEV
LinkDB: A4ZHK6_CAEV
Original site: A4ZHK6_CAEV 
ID   A4ZHK6_CAEV             Unreviewed;       221 AA.
AC   A4ZHK6;
DT   29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT   29-MAY-2007, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   SubName: Full=Pol polyprotein {ECO:0000313|EMBL:ABI29234.1};
DE   Flags: Fragment;
GN   Name=pol {ECO:0000313|EMBL:ABI29234.1};
OS   Small ruminant lentivirus.
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus;
OC   Caprine arthritis encephalitis virus.
OX   NCBI_TaxID=254355 {ECO:0000313|EMBL:ABI29234.1};
RN   [1] {ECO:0000313|EMBL:ABI29234.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=1GA {ECO:0000313|EMBL:ABI29234.1};
RX   PubMed=17240470; DOI=10.1016/j.virusres.2006.12.014;
RA   Gjerset B., Jonassen C.M., Rimstad E.;
RT   "Natural transmission and comparative analysis of small ruminant
RT   lentiviruses in the Norwegian sheep and goat populations.";
RL   Virus Res. 125:153-161(2007).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Endonucleolytic cleavage to 5'-phosphomonoester.; EC=3.1.26.4;
CC         Evidence={ECO:0000256|ARBA:ARBA00000077};
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DR   EMBL; DQ844930; ABI29234.1; -; Genomic_RNA.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 2.40.70.10; Acid Proteases; 1.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR000477; RT_dom.
DR   PANTHER; PTHR33064; POL PROTEIN; 1.
DR   PANTHER; PTHR33064:SF35; RIBONUCLEASE H; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   PROSITE; PS50878; RT_POL; 1.
PE   4: Predicted;
KW   Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022918};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          88..221
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ABI29234.1"
FT   NON_TER         221
FT                   /evidence="ECO:0000313|EMBL:ABI29234.1"
SQ   SEQUENCE   221 AA;  25205 MW;  E73C3AD6DACC6CA7 CRC64;
     NKVPMTYKGR NIQGSLVVLR DSPVEVLGRD NMEAFGVTLI MANLEDKKIP TIPVELKEGC
     KGPHVPQWPL TAEKLQGLTG IVEKLLQEGK LAEAPEGWTW NTPIFCIKKK SGKWRMLIDF
     RELNKQTADL AEAQLGLPHP GGLQRKKNVT ILDIGDAYFT IPLYEPYQKY TCFTLLSPNN
     LGPCKRYYWK VLPQGWKLSP AVYQFTMQRL LKGWIQQHKN I
//
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