ID A5AGH4_VITVI Unreviewed; 622 AA.
AC A5AGH4;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 22-FEB-2023, entry version 32.
DE RecName: Full=Reverse transcriptase Ty1/copia-type domain-containing protein {ECO:0000259|Pfam:PF07727};
GN ORFNames=VITISV_010848 {ECO:0000313|EMBL:CAN62437.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN62437.1};
RN [1] {ECO:0000313|EMBL:CAN62437.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
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DR EMBL; AM426182; CAN62437.1; -; Genomic_DNA.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR013103; RVT_2.
DR PANTHER; PTHR11439; GAG-POL-RELATED RETROTRANSPOSON; 1.
DR PANTHER; PTHR11439:SF436; RETROTRANSPOSON PROTEIN-RELATED; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF07727; RVT_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
FT DOMAIN 161..379
FT /note="Reverse transcriptase Ty1/copia-type"
FT /evidence="ECO:0000259|Pfam:PF07727"
SQ SEQUENCE 622 AA; 72147 MW; B33E5B4E6518638A CRC64;
MNKKYSLEDX GTQKYAIENF KNFQMTXDRD VSSQIHDYHL LINDLAIEDI KLPEPFVAGY
LVETFPESWK DYKNNMKHKR KQMFLEDVII HIKIEEQNRN RDNAEKVKEL SSKANVYKGI
SYAFIKYKNE VENQRNHEII HKTTPPYSLK SNGVVERKNK TLKEMMNAML KYKAHLVAKG
FKQRKDVDYF DNFALVTTIA SSRVLIALAS IHNLVIHQMD VKTAFLNGDL EEEIYMEQLE
GRVVLGKEKK VCKLVKSLYG LKQAPKQWHN KFDHVLVTNG YSINDADKCI YNKYEDNTCV
VICLYVDDML IFGTSLEVVC ETKKFLGPKF DMKDLGEAEV ILGIKITRTP NELKLSQEHY
VEKILRKFEC FDCKLVSTPY DPNSLLKKNK EHSVAQIEHA QIIGGLIYLM NCTRPDIAYA
IGLSDANWIS DSDVMKSTSG YVFIFGGSIV SWKSTKQTCI TRCTMEAKFI ALEKTSFEAE
WSEKLLADIP LWTRRTSSVS MRCDSQATIA KAKSKIFNGK NRHIRLRHNI MKCGIKDFSR
RKGGLHYHVA ETDQLRQVRL ELDVGGCVEY TISLAGKPPY HRKDWDEQST FWRCSHLERN
DFFLNRSDDG VDLWEEMIRR LH
//