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Database: UniProt
Entry: A5AGH4_VITVI
LinkDB: A5AGH4_VITVI
Original site: A5AGH4_VITVI 
ID   A5AGH4_VITVI            Unreviewed;       622 AA.
AC   A5AGH4;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   22-FEB-2023, entry version 32.
DE   RecName: Full=Reverse transcriptase Ty1/copia-type domain-containing protein {ECO:0000259|Pfam:PF07727};
GN   ORFNames=VITISV_010848 {ECO:0000313|EMBL:CAN62437.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN62437.1};
RN   [1] {ECO:0000313|EMBL:CAN62437.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM426182; CAN62437.1; -; Genomic_DNA.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR013103; RVT_2.
DR   PANTHER; PTHR11439; GAG-POL-RELATED RETROTRANSPOSON; 1.
DR   PANTHER; PTHR11439:SF436; RETROTRANSPOSON PROTEIN-RELATED; 1.
DR   Pfam; PF14223; Retrotran_gag_2; 1.
DR   Pfam; PF07727; RVT_2; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE   4: Predicted;
FT   DOMAIN          161..379
FT                   /note="Reverse transcriptase Ty1/copia-type"
FT                   /evidence="ECO:0000259|Pfam:PF07727"
SQ   SEQUENCE   622 AA;  72147 MW;  B33E5B4E6518638A CRC64;
     MNKKYSLEDX GTQKYAIENF KNFQMTXDRD VSSQIHDYHL LINDLAIEDI KLPEPFVAGY
     LVETFPESWK DYKNNMKHKR KQMFLEDVII HIKIEEQNRN RDNAEKVKEL SSKANVYKGI
     SYAFIKYKNE VENQRNHEII HKTTPPYSLK SNGVVERKNK TLKEMMNAML KYKAHLVAKG
     FKQRKDVDYF DNFALVTTIA SSRVLIALAS IHNLVIHQMD VKTAFLNGDL EEEIYMEQLE
     GRVVLGKEKK VCKLVKSLYG LKQAPKQWHN KFDHVLVTNG YSINDADKCI YNKYEDNTCV
     VICLYVDDML IFGTSLEVVC ETKKFLGPKF DMKDLGEAEV ILGIKITRTP NELKLSQEHY
     VEKILRKFEC FDCKLVSTPY DPNSLLKKNK EHSVAQIEHA QIIGGLIYLM NCTRPDIAYA
     IGLSDANWIS DSDVMKSTSG YVFIFGGSIV SWKSTKQTCI TRCTMEAKFI ALEKTSFEAE
     WSEKLLADIP LWTRRTSSVS MRCDSQATIA KAKSKIFNGK NRHIRLRHNI MKCGIKDFSR
     RKGGLHYHVA ETDQLRQVRL ELDVGGCVEY TISLAGKPPY HRKDWDEQST FWRCSHLERN
     DFFLNRSDDG VDLWEEMIRR LH
//
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