ID A5AHQ4_VITVI Unreviewed; 637 AA.
AC A5AHQ4;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=HMG box domain-containing protein {ECO:0000259|PROSITE:PS50118};
GN ORFNames=VITISV_026046 {ECO:0000313|EMBL:CAN64547.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN64547.1};
RN [1] {ECO:0000313|EMBL:CAN64547.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
CC -!- SIMILARITY: Belongs to the peptidase C48 family.
CC {ECO:0000256|ARBA:ARBA00005234}.
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DR EMBL; AM427034; CAN64547.1; -; Genomic_DNA.
DR ExpressionAtlas; A5AHQ4; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0008234; F:cysteine-type peptidase activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR003653; Peptidase_C48_C.
DR PANTHER; PTHR34835; OS07G0283600 PROTEIN-RELATED; 1.
DR PANTHER; PTHR34835:SF34; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR Pfam; PF00505; HMG_box; 1.
DR Pfam; PF02902; Peptidase_C48; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..637
FT /note="HMG box domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002679232"
FT TRANSMEM 615..636
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 47..108
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 47..108
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
SQ SEQUENCE 637 AA; 73772 MW; 19AD8EF5C5E10355 CRC64;
MSSLLLSLSL TSLFQPACPL EILPCLSTNT SPLLWSERDG LXVVRNPKRP IGAWIHYYND
QLAMMKEKDK GVKINDDLRK KLGKKWNALS KVEKENFMAK XKESSKQYSL QKGVVPKLYL
QTRCSPERVI RVIENLEPKQ KAAIEEIGFG SLLQLRCRKI DHGLCLWLIN SFNPNTYMLQ
LYNTCIKLSP IDVEFIMGLR ARGFKIGMNK DVGHKNDLLM LENQIREDKE GGNDFKVRFV
LFVLGALLCP TMKLFVNRSF LHLVEDIDSI KKMNWAEFVL SYLVHGIEEF KKKQQSGVXR
LLIVFNEKFL PLYTRPSPRI TAWGDDEVLD RKRRLKKLGG YANENLKIWV IENEIRDCVD
GNATTMASEN EDDEKFVSNL NKDVIKRLCT EDLNEKNEDA CATSIEVHII PDENENILPL
PIKRSRRDYG KEPLRALCGY PNHVMKTRSS RERKPSKFKV SPFVQKSRKM VKREASESIP
MSIXEDVVDT QSFNVLQSLV ADYVFNKALS KSELLVDFGH EHGVRGDFAC LRPRQNLMDV
QMILCGSPHP XFDRKTSIVS KYISELDDCE KLFIPMHDEC PGHWYLCVID FKNSXTXILD
SLRSKNRDKF RFQSVKTVVC FHVYIFLLFY FFLFHIY
//
