ID   A5ATX2_VITVI            Unreviewed;       828 AA.
AC   A5ATX2;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN   ORFNames=VITISV_036649 {ECO:0000313|EMBL:CAN73795.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN73795.1};
RN   [1] {ECO:0000313|EMBL:CAN73795.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM435460; CAN73795.1; -; Genomic_DNA.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR013103; RVT_2.
DR   PANTHER; PTHR42648:SF18; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR   Pfam; PF14223; Retrotran_gag_2; 1.
DR   Pfam; PF07727; RVT_2; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
FT   DOMAIN          166..263
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          109..138
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          315..357
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        331..357
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   828 AA;  92445 MW;  BE2DF959912FA881 CRC64;
     MQLRLAFQIT KKGPLTMMEY IQKLKHISDS LAAIGEPVPE KDQILQLLSG LGDEYNPIVA
     SLTARDDDLQ LHAVHSILLT HEQRLHLQTT AVEEDLLIAN IATHNRPRRF DMNYQGPHAP
     ASLTSQIGPT PPAQALMAAP SPASTNSWFL DSGATHHLSY TTTNIHNGTP YNGTDSMMVG
     NDLWGPTPIP SSIGARYFLL LIDDYSRFVW LYLLSTKDQV HSTFVQFKTL VENQFQTTIK
     CLQTDHGGEF TDLTRHLNSN KFQPXSIPCI FLGYATFHKG YFCLNPTTGR VYISKHVVFA
     ETTFPFQALT SPSHQSSHFP XTPAFPFPQS PILFPSTTSS PXAIPSEPVP TSPXTSSLSL
     PPLIQVXFMD EAXEISTXSF QDSTAPIXSH PMITRSKSGI CKKKTYLTSL IAEPHTVKQA
     LQDPNWKLAM EXEYQALLKN QTWSLVPPPS NVKIIGCKWV FKLKHKXDGN IDRYKARLVA
     QGFHQTYGID FFETFSXVVK PCTIRLVISI VVSSNRPIKQ LDVHNAFLNG DLQEQLSSHF
     ALRDLGDISY FLGIEVTRLP HVLHLNQQRY IHQLLEHVDL LGAKSASTLG ALGKLLSATN
     GEPLSALDAT HYRNLVGALQ YITLTRPEIS FAVNRACQYM AHPTTSHLQA AKRILRYLKD
     WASCLDDKRR TSGFCLFLGT NLISWSSTKQ CVVSRSSAKS EYRALAFLAA EVSWVQFLLK
     ELCIPQPNNP LIWCDNISVA ALAANSVFHA RSKHLEIDLH FVRDKVLRKE LLIQYVPSTD
     QLANVFTKHV PSYQFSATRT RLSVVPRPVS LRGDDRQAPA PAVDSSXL
//