ID A5AY54_VITVI Unreviewed; 642 AA.
AC A5AY54;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 22-FEB-2023, entry version 46.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=VITISV_013180 {ECO:0000313|EMBL:CAN60729.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN60729.1};
RN [1] {ECO:0000313|EMBL:CAN60729.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
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DR EMBL; AM439876; CAN60729.1; -; Genomic_DNA.
DR AlphaFoldDB; A5AY54; -.
DR ExpressionAtlas; A5AY54; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12459; RRM1_CID8_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR034823; CID8-like_RRM1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR32343:SF22; POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 9; 1.
DR PANTHER; PTHR32343; SERINE/ARGININE-RICH SPLICING FACTOR; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF13966; zf-RVT; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 350..425
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 447..530
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 642 AA; 73907 MW; 898771310D379083 CRC64;
MAAGAEMSGE AVPAVPSSKN SDSKSEFGAG MQSMIVDMLS NLKLNPLAKE FFPSSYSHDH
LIPTDFSKDS PNDAYPNNRR DAWVKDVWRC NEGGGSWTLL FSILFNDWEV DEVCRFFVAL
NGKRVQQAVD DRVIWRETKC GKFSIKSLYK SLVSGPPASF PSLAIWKVSV QPRVIFFGWE
ATWGKTLTLH QLQKRGWALA NRCYLCQRHE ESIDHILLHF EKARTLWALL YSMFRVQWVL
PTTIKEMLLR WNGSFVGKKR KGVWRASPLC LFWTVWKARN KVAFEEEELS IQRLKFSFVY
FLWLETKLSI KDGPSTLVDF IDWRRNNYNQ GRRRLSGRAF RAQREDSIRR TVYVSDIDQH
VTEERLAALF SSCGQVVDCR VCGDPHSVLR FAFVEFADEH GARAALNLGG TMLGYYPVRV
LPSKTAILPV NPTFLPRSED EREMCARTVY CTNIDKKVSQ AEVKNFFERA CGEVSRLRLL
GDHVHSTRIA FVEFAMGQSF KDTSEATGPS CNVALANYRS INLRMEFGDD DAGASNELWW
TTAGCWEKEK LELERKIAEN GIAQSCRHGD VIITYQMEGS LRAKCCLVVG HQRIRWWFAY
ANQGATLVKK ILEKVDFCYE EVLELRRQER EEEECMRERG FW
//