ID A5AZJ5_VITVI Unreviewed; 495 AA.
AC A5AZJ5;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 22-FEB-2023, entry version 27.
DE RecName: Full=Reverse transcriptase Ty1/copia-type domain-containing protein {ECO:0000259|Pfam:PF07727};
GN ORFNames=VITISV_009543 {ECO:0000313|EMBL:CAN65078.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN65078.1};
RN [1] {ECO:0000313|EMBL:CAN65078.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
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DR EMBL; AM441427; CAN65078.1; -; Genomic_DNA.
DR ExpressionAtlas; A5AZJ5; baseline and differential.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR013103; RVT_2.
DR PANTHER; PTHR11439; GAG-POL-RELATED RETROTRANSPOSON; 1.
DR PANTHER; PTHR11439:SF436; RETROTRANSPOSON PROTEIN-RELATED; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF07727; RVT_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE 4: Predicted;
FT DOMAIN 263..401
FT /note="Reverse transcriptase Ty1/copia-type"
FT /evidence="ECO:0000259|Pfam:PF07727"
SQ SEQUENCE 495 AA; 57265 MW; 7DB37460D44FB654 CRC64;
MNLTSYFFVI AQLSGANFKK WKEQIGIVLG CMDLHYALSE PIPTKPTSES SNEQKVLYEK
WGRFNHMSLM IMKGSITPAI RGAISNSNNA MSYIKSIGEQ FIGTCKSLAS TLMIKQITMK
YDGHSGVCEH IMKMSDMASQ LKGMDMAISE GFLVHFIMTS LPSQFGPFKI NYNTQKDKWK
ISELIVMYVQ EEKRLKVEKP NMAHLTIGPN KKILQERYSY VYLIREKSEA LDVFMIYKAE
VENQLNRRIK SVRYDRGGEY YELSRGIKTI GCKWIFKTKH DSKGNVERYK ARLVAKGYTQ
KEGINYEETF SPVSKKDSLR IVMALVTHFD LELHQMDIKT AFLNGDLHEE VYMDQXEGFQ
DKXKEHMVYK LXKXIYDLKQ TSKQWYLKFH EILITFGFKD NLVDQWSIXY AQVCTRPDIA
YKVGMLGRYQ SNPGLHVIDS IMRPLSIYCD NSXAERFSKN NKTTGGSKHI DIKYMVVKFS
RLLISPKSSH SXEFL
//