GenomeNet

Database: UniProt
Entry: A5B4C7_VITVI
LinkDB: A5B4C7_VITVI
Original site: A5B4C7_VITVI 
ID   A5B4C7_VITVI            Unreviewed;       761 AA.
AC   A5B4C7;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   08-NOV-2023, entry version 55.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   ORFNames=VITISV_013866 {ECO:0000313|EMBL:CAN80769.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN80769.1};
RN   [1] {ECO:0000313|EMBL:CAN80769.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   EMBL; AM446146; CAN80769.1; -; Genomic_DNA.
DR   AlphaFoldDB; A5B4C7; -.
DR   ExpressionAtlas; A5B4C7; baseline and differential.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 6.
PE   3: Inferred from homology;
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          64..98
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          193..223
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          224..258
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          326..360
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          428..458
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          459..493
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          669..761
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   761 AA;  85595 MW;  5FFF81F876E11243 CRC64;
     MLELGSIASR VGNFSHLRQL HAQIIHNSLH HHNYWVALLI NHCTRLRAPP HYTHLLFNST
     LNPNVFVFTS MLRFYSHLQD HAKVVLMFEH MQGCGVRPDA FVYPILIKSA GNGGIGFHAH
     VLKLGHGSDA FVRNAVIDMY ARLGPIGHAR KVFDEIPDYE RKVADWNAMV SGYWKWESEG
     QAQWLFDVMP ERNVITWTAM VTGYAKVKDL EAARRYFDCM PERSVVSWNA MLSGYAQNGL
     AEEVLRLFDE MVNAGIEPDE TTWVTVISAC SSRGDPCLAA SLVRTLHQKQ IQLNCFVRTA
     LLDMYAKCGS IGAARRIFDE LGAYRNSVTW NAMISAYTRV GNLDSARELF NTMPGRNVVT
     WNSMIAGYAQ NGQSAMAIEL FKEMITAKKL TPDEVTMVSV ISACGHLGAL ELGNWVVRFL
     TENQIKLSIS GHNAMIFMYS RCGSMEDAKR VFQEMATRDV VSYNTLISGF AAHGHGVEAI
     NLMSTMKEGG IEPDRVTFIG VLTACSHAGL LEEGRKVFES IKDPAIDHYA CMVDLLGRVG
     ELEDAKRTME RMPMEPHAGV YGSLLNASRI HKQVELGELA ANKLFELEPD NSGNFILLSN
     IYASAGRWKD VERIREAMKK GGVKKTTGWS WVEYGGKLHK FIVADRSHER SDDIYQLLIE
     LRKKMREAGY IADKSCVLRD VEEEEKEEIV GTHSEKLAIC YALLVSEAGA VIRVVKNLRV
     CWDCHTAIKM ISKLEGRVII VRDNNRFHCF NDGLCSCKDY W
//
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