ID A5B4C7_VITVI Unreviewed; 761 AA.
AC A5B4C7;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 08-NOV-2023, entry version 55.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=VITISV_013866 {ECO:0000313|EMBL:CAN80769.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN80769.1};
RN [1] {ECO:0000313|EMBL:CAN80769.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; AM446146; CAN80769.1; -; Genomic_DNA.
DR AlphaFoldDB; A5B4C7; -.
DR ExpressionAtlas; A5B4C7; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 64..98
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 193..223
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 224..258
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 326..360
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 428..458
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 459..493
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 669..761
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 761 AA; 85595 MW; 5FFF81F876E11243 CRC64;
MLELGSIASR VGNFSHLRQL HAQIIHNSLH HHNYWVALLI NHCTRLRAPP HYTHLLFNST
LNPNVFVFTS MLRFYSHLQD HAKVVLMFEH MQGCGVRPDA FVYPILIKSA GNGGIGFHAH
VLKLGHGSDA FVRNAVIDMY ARLGPIGHAR KVFDEIPDYE RKVADWNAMV SGYWKWESEG
QAQWLFDVMP ERNVITWTAM VTGYAKVKDL EAARRYFDCM PERSVVSWNA MLSGYAQNGL
AEEVLRLFDE MVNAGIEPDE TTWVTVISAC SSRGDPCLAA SLVRTLHQKQ IQLNCFVRTA
LLDMYAKCGS IGAARRIFDE LGAYRNSVTW NAMISAYTRV GNLDSARELF NTMPGRNVVT
WNSMIAGYAQ NGQSAMAIEL FKEMITAKKL TPDEVTMVSV ISACGHLGAL ELGNWVVRFL
TENQIKLSIS GHNAMIFMYS RCGSMEDAKR VFQEMATRDV VSYNTLISGF AAHGHGVEAI
NLMSTMKEGG IEPDRVTFIG VLTACSHAGL LEEGRKVFES IKDPAIDHYA CMVDLLGRVG
ELEDAKRTME RMPMEPHAGV YGSLLNASRI HKQVELGELA ANKLFELEPD NSGNFILLSN
IYASAGRWKD VERIREAMKK GGVKKTTGWS WVEYGGKLHK FIVADRSHER SDDIYQLLIE
LRKKMREAGY IADKSCVLRD VEEEEKEEIV GTHSEKLAIC YALLVSEAGA VIRVVKNLRV
CWDCHTAIKM ISKLEGRVII VRDNNRFHCF NDGLCSCKDY W
//