ID A5BC97_VITVI Unreviewed; 841 AA.
AC A5BC97;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE RecName: Full=DYW domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=VITISV_043633 {ECO:0000313|EMBL:CAN74403.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN74403.1};
RN [1] {ECO:0000313|EMBL:CAN74403.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
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DR EMBL; AM454284; CAN74403.1; -; Genomic_DNA.
DR ExpressionAtlas; A5BC97; baseline.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 125..159
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 226..260
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 327..361
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 429..463
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 612..646
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 841 AA; 94133 MW; 4B710F70234CC4DD CRC64;
MGMTTASMGL QRLTLSPTKI QIKDPKHWNS VIKHQANLKN DQAILSAYTQ MESLGVLPNN
TTLPLVLKAC AAQNAVERGK SIHRSIQGTD LMDDVRVGTA VVDFYCKCGF VEDARCVFDA
MSDRDVVLWN AMVYGYVGWG CYEEAMLLVR EMGRENLRPN SRTMVALLLA CEGASELRLG
RGVHGYCLRN GMFDSNPHVA TALIGFYLRF DMRVLPLLFD LMVVRNIVSW NAMISGYYDV
GDYFKALELF VQMLVDEVKF DCVTMLVAVQ ACAELGSLKL GKQIHQLAIK FEFVEDLYIL
NALLNMYSNN GSLESSHQLF ESVPNRDAPL WNSMISAYAA FGCHEEAMDL FIRMQSEGVK
KDERTVVIML SMCEELASGL LKGKSLHAHV IKSGMRIDAS LGNALLSMYT ELNCVESVQK
IFDRMKGVDI ISWNTMILAL ARNTLRAQAC ELFERMRESE IKPNSYTIIS ILAACEDVTC
LDFGRSIHGY VMKHSIEINQ PLRTALADMY MNCGDEATAR DLFEGCPDRD LISWNAMIXK
AEPNSVTIIN VLSSFTHLAT LPQGQSLHAY VTRRGFSLGL DLSLANAFIT MYARCGSLQS
AENIFKTLPK RNIISWNAMI AGYGMNGRGS DAMLAFSQML EDGFRPNGVT FVSVLSACSH
SGFIEMGLQL FHSMVQDFNV TPELVHYSCI VDLLARGGCI DEAREFIDSM PIEPDASVWR
ALLSSCRAYS DAKQAKTIFE KLDKLEPMNA GNYVLLSNVY ATAGLWLEVR RIRTWLKEKG
LRKPPGISWI IVKNQVHCFS AGDRSHPQSD KIYAKLSILL SSMRETGYDP DLRWVFHEED
D
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