ID A5BCK6_VITVI Unreviewed; 588 AA.
AC A5BCK6;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 08-NOV-2023, entry version 55.
DE RecName: Full=SET domain-containing protein {ECO:0000259|PROSITE:PS50280};
GN ORFNames=VITISV_025097 {ECO:0000313|EMBL:CAN74411.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN74411.1};
RN [1] {ECO:0000313|EMBL:CAN74411.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
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DR EMBL; AM454632; CAN74411.1; -; Genomic_DNA.
DR ExpressionAtlas; A5BCK6; differential.
DR CDD; cd20071; SET_SMYD; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR47643; TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710); 1.
DR PANTHER; PTHR47643:SF2; TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710); 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00317; SET; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50280; SET; 1.
PE 4: Predicted;
FT DOMAIN 234..422
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT REGION 41..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 41..63
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 588 AA; 65946 MW; E47EFC4DA017AE89 CRC64;
MWFAVNTVGL GQNESMKFWE NGHHRVRMVR TLRGEGVEER KIKEKRESPA AAADERRSGD
GRRADAAAQI QSYRAPPQRR MERLRTSLLS FHLSLPTAHL TYPINTLNPD HLFKLQKSLC
LALSNRAEAR SRLRDLANAL QDCDGALKIE CTHFKTLLCK GKILLGLNRY SLALDCFKAA
LLDPQAGLKC GALEGYLERC KKLEHQSRTG AFDLSDWVVN GFRGKFPELA EYIGAVQIMK
SEISGRGLFA TKNVDAGTLV LVTKAIATER CILPEQNDDS ADNIQLVMWK NFIDKVVESA
SKCKRLHHLI SVLSSGEXED VLEVPDVNLF RPETEESGLS KGKLDMGKIL SILDVNSLVE
DATSAKVLGK NSDYYGVGLW ILPAFINHSC NPNARRLHVG DHVIVHASRD VKAGEEITFA
YFDVLSPWRK RTDMAKTWGF QCNCKRCKFE EQLCSKMEIQ EIQMGLERGL DMGDAVYRLE
EGMRRWMVRG KEKGYLRASF WAAYSEAYES EKTVKRWGRR IPAVEAVVDG VLEAVGSDER
VLKAFMAGLK RSGGGGVVEI ERAMKLARGV YGKVVKKQAM RTLISLGY
//