ID A5BD41_VITVI Unreviewed; 1429 AA.
AC A5BD41;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 24-JAN-2024, entry version 65.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
DE Flags: Fragment;
GN ORFNames=VITISV_008274 {ECO:0000313|EMBL:CAN60041.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN60041.1};
RN [1] {ECO:0000313|EMBL:CAN60041.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|ARBA:ARBA00001974};
CC -!- PATHWAY: Amine and polyamine degradation; spermine degradation.
CC {ECO:0000256|ARBA:ARBA00004723}.
CC -!- SIMILARITY: Belongs to the flavin monoamine oxidase family.
CC {ECO:0000256|ARBA:ARBA00005995}.
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DR EMBL; AM455079; CAN60041.1; -; Genomic_DNA.
DR ExpressionAtlas; A5BD41; baseline and differential.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0071704; P:organic substance metabolic process; IEA:UniProt.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.90.660.10; -; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR002937; Amino_oxidase.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR001613; Flavin_amine_oxidase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR028919; Viral_movement.
DR PANTHER; PTHR10742:SF313; AMINE OXIDASE; 1.
DR PANTHER; PTHR10742; FLAVIN MONOAMINE OXIDASE; 1.
DR Pfam; PF01593; Amino_oxidase; 2.
DR Pfam; PF01107; MP; 1.
DR Pfam; PF00078; RVT_1; 1.
DR PRINTS; PR00757; AMINEOXDASEF.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF54373; FAD-linked reductases, C-terminal domain; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 3: Inferred from homology;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002}.
FT DOMAIN 1208..1390
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT NON_TER 1429
FT /evidence="ECO:0000313|EMBL:CAN60041.1"
SQ SEQUENCE 1429 AA; 164551 MW; FF2A0D1BD9702A04 CRC64;
MELQIELRTG GMLITKTRVL LASLTAIMAV VFSASSAIAA EEVHAVVIVG AGMSGISAAN
KLSXAGIENI LILEATNRIG GRIQKTNFAG LSVEIGASWV EGVGGPRLNP IWDMVNRLKL
TTFYSNYDNI SSNAYKQKGG LYEKSEAQNA FYAAQELSEF IKNVSKVPST PLDMAIDYIA
YDYEFSEPPR VTSLKNSIPL HTFSKFGEDA YFVADPKGYE SVVYFVAKQF LTTNESGEIT
DPRLLFNKVV NEISYSKNGV TVKTEDGSVY RAEYVMVSAS IGVLQSGLIN FKPDLPPWKI
LAMYQFDMAV YTKIFLKFPD KFWPTGNGTE FFFYAHEKRG YYTIWQQLEE EYPGANFLLV
TVTDDESRRI EQQPDSDTKA EIMGVLRAMF GKNISEATDI LVPRWWSDKF YRGSYSNWPI
GVSRLEYDRI RAPVGRVYFT GEHTSEYFNG YVHGAYLAET RDGHYCQHLG QRTLRSSDSQ
DTVVNSEEIN YPKIQNDLDD WKLPNVSNQE IYKKGTFKFF TDYTIKTFEM SVSLEQDDQV
IRLLDNRSIE KHKRDGYNFI HFGMIQVAAK PLTKLGLNTS IVMCLRDNRH LXYRNSIIGA
VQAGLNDGPV YFQCYPNFTV RIRDADILDS VVLHIKTHGF KIKPXNXXVS IITRFAYKSM
NTSVGFRALC TSPKGETTYF HSDMLDKSDF IIPKKILWKD VEFPENWHFV NVVPAIAQRS
ESIEQIVQYP DGGGELVSPT LSDIPAALEF LFMNPLELQA LPSQLEXLXK KKLTDVRSHT
NVARPFYTEE NESTQEFQQE ESPVMSPTYS QMINTISLSD EDFEINKDLL RXDFYSEVNK
QRNDWFFSTV PKVIRTIYQE EFYAYLRQEK KNIKFWIWFE LFKQEEYPNY PCKHINNTST
KAKIWKTSDN IVIESIHXPK AKIEKNINGT IVTASPFKTK PKDKGTASAI DIRRIMEQIN
YTNMFLITLG NQVNRVEEII ETQDHLKKSF VKNDNKPLFK PFELSKKFQE NPQIDQAFID
RISQKDHSDK QEIILKTLTI KDLQEEIGQY KKDIKNLRQP TSSEFPIPHD YINRASFNHN
SPKKEDFEEV LESSQDNSDK INAYLNTISK VIFQRWEVSL TIVIKNKFIL DIIALIDSGA
ALNCLQKGLV PTQLYEKTRQ ALFGANGKKL IIKYKLLNAH ICNQGICIKQ TFILVKDLKE
KALLXDLMDK KLIRKSKSPW SCSAFYVQKQ AELERGTPRL VINYKPLNDV LRWIRYXIPN
KKDLLQRLVK SKVFSKFDMK SGFWQIQIAE KDKYKTAFVV PFGHYEWNVM PFGLKNAPSE
FQNIMNEIFN QFSNFIIVYI DDVLIYSDSV EQHWKHLNKF VETVKSNGLS LSATKINLFQ
TKVRFLGHHI HQGTFTPIQR SIEFADKFPY EIKDKKQLQR FLGSLNYVX
//