ID   A5BGX5_VITVI            Unreviewed;      1094 AA.
AC   A5BGX5;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   27-MAR-2024, entry version 43.
DE   RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN   ORFNames=VITISV_001300 {ECO:0000313|EMBL:CAN65647.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN65647.1};
RN   [1] {ECO:0000313|EMBL:CAN65647.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM459183; CAN65647.1; -; Genomic_DNA.
DR   ExpressionAtlas; A5BGX5; baseline and differential.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR025724; GAG-pre-integrase_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR013103; RVT_2.
DR   PANTHER; PTHR42648:SF18; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR   Pfam; PF13976; gag_pre-integrs; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF07727; RVT_2; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
FT   DOMAIN          325..494
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   1094 AA;  122442 MW;  BE3D1CE5C9A57FF2 CRC64;
     MITSEKLVGS ENYLSWSASV ELWXMGQELY TNDIQRLYKV ASSIVNVRQQ DMDLSTYIGQ
     IASLKEEFLT VMPLTTDVGD QRTQIDKFFM VLTDLETVRD QILGSSSVPS LDDVFACLLR
     ISFTQTLPSD NTSDSSDAVV TEVEANVLIA PIAISLVTLV IGVISYMGGL PALPTWPSHL
     ILSRLSLPYD DYLRYQATKS ASVAQTDSGT SDHISGNKDF FSSITTTSAL PTVTLANGSQ
     TMAKGFGFAH PLPSLPLHSV LYAPECPFNL ISISKITCTL NCSITFSDKF VTLQDRSTGK
     TIGIGRESQG LYHLTSPSTP AVCISTDAPL LIHSRLGHPS LSKFQKMYFV TFIDNYSRCT
     WLFLMKNRAE LFSIFQKFHA EIQTQFNISI RVLRSDNARE YFSAPFTSFM SQHGIIHQSS
     CAHTPQQNGV AERKNRHLVE TAHTCLLHSH VPFRFWGDAV LTACYLINRM PSSILHDQIL
     HSLLFPDQPL YFLPPRVFGC TCFVHILTPG QDKLSARATK CIFLGYSRLQ KGYRCYSSEI
     HRYFLSVDVT FFKDSLFFST FKSLPVSEVL PLPIISPLDA VPSRPLQVYY HRHRVAIPPS
     LAEVPADSLP IPSASPTPAL PPSADLPITL RKGWRQAMVD EMAALHSNGT WDLVVLPSGK
     STIGCRWVYT VKVGPDGQVD RLKARLVAKG YTQVYGSDYG DTFSLVAKIA SVCLLLSMAA
     MCSWLLYQLD IKNAFLHGDL AEEVYMEQPP GFVAQGESGL VCRLHHYLYG LKQSPRVWFS
     RFSSVVQEFG MFRSTADHSV FYHYNSSGQC IYLVVYVDDI VITGSDQNGI QKLKQHLFTH
     FQTKDLGKLK YFLGIEIAQS NSGVVLSQRK YALDILEETG MLDCKPIDTP MDPNVKLIPG
     QSPCDSHWDA VIRILRYIKS TPGQGVLYEN RGHAQVVGYT DADWAGSPTN RRSTFVYCVF
     IRGNLISWKS KKQDVVVRSS VEAEYRAMAL ATCELIWLKH LLREFRFGKD EQMKLICDNQ
     ADLHIASNPV FHERTKHIEV DCHFIREKIA SGCVATSFVN SNDQLADFFT KSLKGPRIKY
     ICNKLGAYNI YAPT
//