ID   A5BI38_VITVI            Unreviewed;       969 AA.
AC   A5BI38;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   27-MAR-2024, entry version 45.
DE   RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN   ORFNames=VITISV_029328 {ECO:0000313|EMBL:CAN74609.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN74609.1};
RN   [1] {ECO:0000313|EMBL:CAN74609.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM460234; CAN74609.1; -; Genomic_DNA.
DR   ExpressionAtlas; A5BI38; baseline and differential.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR013103; RVT_2.
DR   PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR   PANTHER; PTHR42648:SF11; TRANSPOSON TY4-P GAG-POL POLYPROTEIN; 1.
DR   Pfam; PF14223; Retrotran_gag_2; 1.
DR   Pfam; PF07727; RVT_2; 2.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
FT   DOMAIN          421..521
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          1..21
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          47..69
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        51..69
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   969 AA;  111215 MW;  2A709A369D078F8E CRC64;
     MEKLLSNPSK TNNRRFGKFR GRKLRIAKQS SRKQXFTGEI FSAVGSQGEX IESESERHSR
     ERKSCREKET DERASDVVLR DEKDHSRWFS DPAFTLGSRH GDENSGPLIS FLFGEKFWAV
     DCDXSSSAEK SELGQNCRVT RRFGHVKSEW GPRVFGAKNA QPVEVTANRL NRLRNRSTNC
     SRPVNRLWSS DRGPVEGSIQ LANFSNIKCD IPELKGDNYK VWKERILLHL GCMDIDYAIR
     KDKPTIIDTS TTAEKALYEQ WERSNRLSLM FIKTKISYGI RGFVDQHDNV KALLKVIDEQ
     FVTLDKALAN TLVMKFSSLR LTDVSGVREH IMQVRNIAAQ LKTLEVEMSD SFLVHFILNT
     FPQQYGPFKI SYNTHKDKWS INELLTMCVQ EEGRLKMELD ESALMXMEGK DHNQAKKKRK
     DKGGEYYGRY TENGQAPGPF AKFLQEHGIV AQYTMPGSSY QNGVTERRKR TLMDMVRSMH
     SNSKLPESLW IEDLKTTVYI LNRVPTKVVP KTPFELWKGW KLSLRHIRIW GYPSKDIVSE
     KDHIDAQPST SISQIANDNP VDQLVQDSPK IVEQPVEQRD PQEHVDATLR RSTRVRKTTI
     PSDYVVYLQE SDYDIGTEND PETFSQAINC KESNLWYDAM KDEMNSMASN GVWNLVELPG
     GAKAIGCKWV FKTNKDSLGN IERYKARLIA KGFTQNEGID YNETFSPVSK KDSLHIIMTL
     VAHFDLELQQ MDVKTTFLNG NLEEEVYKKQ PEEFSSSGVS RSKICFLILY VDDILLATNV
     KGLLHEVKQF LSKNFDMKDM GDATYVIGIK IHRDRFRGLL GLSQDTYINK VLKRFRMKDC
     SPRIDPIMKG DRFNLDQCPK NDLEWEQMKN IPYAYVVGSL MYAQVCTRLD IAFAVGMFGR
     YQSNPGIDHW KASKKVMRYL QGTKDYMLMY KQTNNLEVIG YSDSDYVGCI DSRKSTSGYV
     FMLADGAVS
//