ID A5BL88_VITVI Unreviewed; 494 AA.
AC A5BL88;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN ORFNames=VITISV_019128 {ECO:0000313|EMBL:CAN63605.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN63605.1};
RN [1] {ECO:0000313|EMBL:CAN63605.1}
RP NUCLEOTIDE SEQUENCE.
RA Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT vinifera L.): coping with a highly heterozygous genome.";
RL PLoS ONE 2:e1326-e1326(2007).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR EMBL; AM463399; CAN63605.1; -; Genomic_DNA.
DR AlphaFoldDB; A5BL88; -.
DR ExpressionAtlas; A5BL88; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR PANTHER; PTHR36968:SF8; HOMEOBOX-DDT DOMAIN PROTEIN RLT3 ISOFORM X1; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682}.
FT DOMAIN 7..44
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 9..45
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 245..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 265..289
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 494 AA; 55536 MW; 33421E39A876EC56 CRC64;
MILGDAEDNY PTQRVMKDYA AALGLTYKQV RGWFFERRRK EKNENGMGVS SSKKLVRAKN
GIGVVAAKKI IRRVGLAAHC RGNMSSSSTY NRACLGAHHW HCFRNHDSRA VERGKILNED
LSTTDYILKK VFRKDGPPLG VEFDSLPSSS FCHCTDSRNS HRTCQENQTS SKRRKVVVVS
KPAVLHQQFC NNKSAPAKIH GIGKGLMTVW RATNPGAGDF PTGIDFADGQ VAAVSPTSTS
ILRKSLIKKK KPRKQSSVTK WKSVGGKLND KKKPSRKRGK VECNKDVNQK KPNKEKCELA
LEEGKSQEHL DQFAMLMDDE ELELQESQAG PNPVTCSAHF ATNGLHGCSL CKDLLAKFPP
NAVKMKQPFC MQPWDSSPEL VKKMFKFIVM EFQLGRIKSF VRAFTSLYKI IAKVLSGRLR
KVLHETISGS QGAFVEGRHI LDVVLIANEV VDEKRRSGEE GVVFKIDFEK AYDHVDWGFL
DHVLQRKGFS QKWR
//
