ID A5ILX7_THEP1 Unreviewed; 454 AA.
AC A5ILX7;
DT 26-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2007, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=RNAse G {ECO:0000313|EMBL:ABQ47200.1};
DE EC=3.1.4.- {ECO:0000313|EMBL:ABQ47200.1};
GN OrderedLocusNames=Tpet_1186 {ECO:0000313|EMBL:ABQ47200.1};
OS Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 /
OS RKU-1).
OC Bacteria; Thermotogota; Thermotogae; Thermotogales; Thermotogaceae;
OC Thermotoga.
OX NCBI_TaxID=390874 {ECO:0000313|EMBL:ABQ47200.1, ECO:0000313|Proteomes:UP000006558};
RN [1] {ECO:0000313|Proteomes:UP000006558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1
RC {ECO:0000313|Proteomes:UP000006558};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C.,
RA Tapia R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.;
RT "Complete sequence of Thermotoga petrophila RKU-1.";
RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABQ47200.1, ECO:0000313|Proteomes:UP000006558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1
RC {ECO:0000313|Proteomes:UP000006558};
RX PubMed=19307556; DOI=10.1073/pnas.0901260106;
RA Zhaxybayeva O., Swithers K.S., Lapierre P., Fournier G.P., Bickhart D.M.,
RA DeBoy R.T., Nelson K.E., Nesbo C.L., Doolittle W.F., Gogarten J.P.,
RA Noll K.M.;
RT "On the chimeric nature, thermophilic origin, and phylogenetic placement of
RT the Thermotogales.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:5865-5870(2009).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR EMBL; CP000702; ABQ47200.1; -; Genomic_DNA.
DR RefSeq; WP_011943705.1; NC_009486.1.
DR AlphaFoldDB; A5ILX7; -.
DR STRING; 390874.Tpet_1186; -.
DR KEGG; tpt:Tpet_1186; -.
DR eggNOG; COG1530; Bacteria.
DR HOGENOM; CLU_003468_5_3_0; -.
DR Proteomes; UP000006558; Chromosome.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:ABQ47200.1};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 19..92
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 454 AA; 52529 MW; C05EF08F804DC5B5 CRC64;
MDDGELEEIF FDEIETIAGK IYLGKIEKIV PGLEAAFVKI GKGRNAFLKL SEINEVYRET
ILKEQEVKEG QKILVQVKKD ASGKKGPQVT TQIGIADRFV VIFPFKKVIG VSRKIEDASE
RRRLRTTAFS LRKRHGVGVI VRTAAEGVDE EEIIKNFERA LEKWNQVLQK FRRSRKPKLL
HEEDPVEQII KEKVNSKIDR LIYNNRSLLE TLQKYLQNLP KKPELEYVEG DLFEKFSVYE
RMKKLLSRTV QLKSGGNIVI DRTEALTVID VNSESYTDAE NQEELALKTN MEAIEEIVRQ
LILRNIGGIV VIDFIKQKDP KSYEKLLSRF KEVAKRDGTR IEIFGFTNLG LLEITRKRTT
RPLDTLLFTR CPVCSGTGKV LSQKILLKRI REDLKKLKNF EEVTLKVHPN MSGYFKREDI
KKLQKEFKVK LNLDYGWHDP NSYEIKAKTK KGGK
//
