ID A5W068_PSEP1 Unreviewed; 512 AA.
AC A5W068;
DT 10-JUL-2007, integrated into UniProtKB/TrEMBL.
DT 10-JUL-2007, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=HTH-type transcriptional repressor AllR {ECO:0000256|ARBA:ARBA00040379};
DE AltName: Full=Negative regulator of allantoin and glyoxylate utilization operons {ECO:0000256|ARBA:ARBA00042627};
GN OrderedLocusNames=Pput_1370 {ECO:0000313|EMBL:ABQ77528.1};
OS Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=351746 {ECO:0000313|EMBL:ABQ77528.1};
RN [1] {ECO:0000313|EMBL:ABQ77528.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F1 {ECO:0000313|EMBL:ABQ77528.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Lykidis A., Parales R., Richardson P.;
RT "Complete sequence of Pseudomonas putida F1.";
RL Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000712; ABQ77528.1; -; Genomic_DNA.
DR AlphaFoldDB; A5W068; -.
DR KEGG; ppf:Pput_1370; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_527709_0_0_6; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 17..80
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 318..499
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
FT REGION 166..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..184
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 512 AA; 55163 MW; BB77BD9C54FDAF5D CRC64;
MPNAPTENAA PKAPAATSSH GRLIEVLDAL VRRADGEAWG VRELASDLGE SRSTINRILV
ALVDRDFAVE DGVGKYRVGP RFRVLMHALN HRSRLLERAR HLLDGLAEGA KQAALLSVYA
PHLNGYYVLH CGEAPATLFF RPKSGNPFPL EFGDIGRAFS EYLRQHPSSD EISPGQSSIE
PPQGISETEF PPAVSMVVRQ LAPGLLILVS LHDLGSIDAK VRDSARATLN EIADRLSQEF
GVSDSFGREV INDGDSSIVA RLEGLLQLAC AEPNGYRCRL GMAAQLQCNA ATAKKIIGSA
TLERLIHIDG EVIYPGARLY QWAALLSNET YSPVKLCKAI VDALVKETGE TIAYLSFDGA
TSKAQFLEVI QGWRPIHYKL ETGVDVPLYA GGAGKAVLAH LPADFADGLK LERFTEATIT
SHSKLRADLQ SIRDRGWSVG DGERVLGAFG IGVPFFIDGQ VAGSISATIP QYRKEDCDVP
SLVENMKLAS RRIGHLLSLG ETGGIAHGSG DD
//
