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Entry: A6LZ24_CLOB8
LinkDB: A6LZ24_CLOB8
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ID   A6LZ24_CLOB8            Unreviewed;       149 AA.
AC   A6LZ24;
DT   24-JUL-2007, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2007, sequence version 1.
DT   24-JAN-2024, entry version 89.
DE   SubName: Full=Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABR35604.1};
GN   OrderedLocusNames=Cbei_3480 {ECO:0000313|EMBL:ABR35604.1};
OS   Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium
OS   acetobutylicum).
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=290402 {ECO:0000313|EMBL:ABR35604.1, ECO:0000313|Proteomes:UP000000565};
RN   [1] {ECO:0000313|EMBL:ABR35604.1, ECO:0000313|Proteomes:UP000000565}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G.,
RA   Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W.,
RA   Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B.,
RA   Blaschek H., Richardson P.;
RT   "Complete sequence of Clostridium beijerinckii NCIMB 8052.";
RL   Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABR35604.1, ECO:0000313|Proteomes:UP000000565}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RX   PubMed=21962126; DOI=10.1186/1471-2164-12-479;
RA   Wang Y., Li X., Mao Y., Blaschek H.P.;
RT   "Single-nucleotide resolution analysis of the transcriptome structure of
RT   Clostridium beijerinckii NCIMB 8052 using RNA-Seq.";
RL   BMC Genomics 12:479-479(2011).
RN   [3] {ECO:0000313|EMBL:ABR35604.1, ECO:0000313|Proteomes:UP000000565}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RX   PubMed=22433311; DOI=10.1186/1471-2164-13-102;
RA   Wang Y., Li X., Mao Y., Blaschek H.P.;
RT   "Genome-wide dynamic transcriptional profiling in clostridium beijerinckii
RT   NCIMB 8052 using single-nucleotide resolution RNA-Seq.";
RL   BMC Genomics 13:102-102(2012).
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DR   EMBL; CP000721; ABR35604.1; -; Genomic_DNA.
DR   RefSeq; WP_012059654.1; NC_009617.1.
DR   AlphaFoldDB; A6LZ24; -.
DR   GeneID; 66346375; -.
DR   KEGG; cbe:Cbei_3480; -.
DR   eggNOG; COG1846; Bacteria.
DR   HOGENOM; CLU_083287_27_4_9; -.
DR   OMA; NILWHRM; -.
DR   Proteomes; UP000000565; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR000835; HTH_MarR-typ.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR42756; TRANSCRIPTIONAL REGULATOR, MARR; 1.
DR   PANTHER; PTHR42756:SF1; TRANSCRIPTIONAL REPRESSOR OF EMRAB OPERON; 1.
DR   Pfam; PF01047; MarR; 1.
DR   PRINTS; PR00598; HTHMARR.
DR   SMART; SM00347; HTH_MARR; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50995; HTH_MARR_2; 1.
PE   4: Predicted;
FT   DOMAIN          1..144
FT                   /note="HTH marR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50995"
SQ   SEQUENCE   149 AA;  18004 MW;  50C90D1F5D2A3C8C CRC64;
     MDKECKKQID EFNILWHRML FESSYKDIEA KYTRIKGLSD NEISIIRIIS EKEEVIIRDI
     LEILNIPKST LTNMIDRLEK RNLIMRSISK RDRRSYKLEL TEEGKKAQEE HIKFEEEIYG
     KVMISLDTYE ERENLLNIMR KIVYNISSR
//
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