ID A6TTG9_ALKMQ Unreviewed; 334 AA.
AC A6TTG9;
DT 21-AUG-2007, integrated into UniProtKB/TrEMBL.
DT 21-AUG-2007, sequence version 1.
DT 24-JAN-2024, entry version 68.
DE SubName: Full=RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:ABR49487.1};
GN OrderedLocusNames=Amet_3359 {ECO:0000313|EMBL:ABR49487.1};
OS Alkaliphilus metalliredigens (strain QYMF).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Alkaliphilus.
OX NCBI_TaxID=293826 {ECO:0000313|EMBL:ABR49487.1, ECO:0000313|Proteomes:UP000001572};
RN [1] {ECO:0000313|Proteomes:UP000001572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=QYMF {ECO:0000313|Proteomes:UP000001572};
RX PubMed=27811105; DOI=10.1128/genomeA.01226-16;
RA Hwang C., Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina Del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F.,
RA Land M.L., Hauser L., Kyrpides N., Mikhailova N., Ye Q., Zhou J.,
RA Richardson P., Fields M.W.;
RT "Complete genome sequence of Alkaliphilus metalliredigens strain QYMF, an
RT alkaliphilic and metal-reducing bacterium isolated from borax-contaminated
RT leachate ponds.";
RL Genome Announc. 4:0-0(2016).
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DR EMBL; CP000724; ABR49487.1; -; Genomic_DNA.
DR AlphaFoldDB; A6TTG9; -.
DR STRING; 293826.Amet_3359; -.
DR KEGG; amt:Amet_3359; -.
DR eggNOG; COG3344; Bacteria.
DR HOGENOM; CLU_013584_2_0_9; -.
DR OMA; DCVERRI; -.
DR Proteomes; UP000001572; Chromosome.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006974; P:DNA damage response; IEA:UniProt.
DR CDD; cd01651; RT_G2_intron; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR030931; Group_II_RT_mat.
DR InterPro; IPR013597; Mat_intron_G2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR NCBIfam; TIGR04416; group_II_RT_mat; 1.
DR PANTHER; PTHR34047:SF3; BLR2052 PROTEIN; 1.
DR PANTHER; PTHR34047; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF08388; GIIM; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Nucleotidyltransferase {ECO:0000313|EMBL:ABR49487.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001572};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:ABR49487.1};
KW Transferase {ECO:0000313|EMBL:ABR49487.1}.
FT DOMAIN 1..212
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 334 AA; 39643 MW; 2D80106FB5C17164 CRC64;
MLTLPTIADR VAQMVVKMYV EPLVEPLFHE DSYGYRPQKS AIDAIGQARK RCWKYDFVIE
FDIRGLFDNI DHELLMKVVK KHVKEKWIQL YIVRWLKTPF ALKDRTMVTR TTGTPQGGVI
SPLLANMFMH YAFDKWMDRG FPYAPFERYA DDAIIHCRTE QEAEEILKVL DERMKSCKLE
LHPQKTRIVY CKDKDRKSEY PNVEFDFLGY TFKGTFIKNR TGQMGINFIA SASKKANKLF
RAKIKALKIH KKTGCKIDMI AQWINPIVRG WINYFGKYNA SAIKYTLDCV ERRIVKWAMC
KFKNFRGHRR RAEKWLDEIR KREPSLFAHW NCRN
//