ID A6U674_SINMW Unreviewed; 551 AA.
AC A6U674;
DT 21-AUG-2007, integrated into UniProtKB/TrEMBL.
DT 21-AUG-2007, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=Alpha amylase catalytic region {ECO:0000313|EMBL:ABR59154.1};
GN OrderedLocusNames=Smed_0295 {ECO:0000313|EMBL:ABR59154.1};
OS Sinorhizobium medicae (strain WSM419) (Ensifer medicae).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=366394 {ECO:0000313|EMBL:ABR59154.1, ECO:0000313|Proteomes:UP000001108};
RN [1] {ECO:0000313|Proteomes:UP000001108}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WSM419 {ECO:0000313|Proteomes:UP000001108};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G.,
RA Richardson P.;
RT "Complete sequence of Sinorhizobium medicae WSM419 chromosome.";
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABR59154.1, ECO:0000313|Proteomes:UP000001108}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WSM419 {ECO:0000313|EMBL:ABR59154.1,
RC ECO:0000313|Proteomes:UP000001108};
RX PubMed=21304680; DOI=10.4056/sigs.43526;
RA Reeve W., Chain P., O'Hara G., Ardley J., Nandesena K., Brau L., Tiwari R.,
RA Malfatti S., Kiss H., Lapidus A., Copeland A., Nolan M., Land M.,
RA Hauser L., Chang Y.J., Ivanova N., Mavromatis K., Markowitz V.,
RA Kyrpides N., Gollagher M., Yates R., Dilworth M., Howieson J.;
RT "Complete genome sequence of the Medicago microsymbiont Ensifer
RT (Sinorhizobium) medicae strain WSM419.";
RL Stand. Genomic Sci. 2:77-86(2010).
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DR EMBL; CP000738; ABR59154.1; -; Genomic_DNA.
DR RefSeq; WP_011974504.1; NC_009636.1.
DR RefSeq; YP_001325989.1; NC_009636.1.
DR AlphaFoldDB; A6U674; -.
DR STRING; 366394.Smed_0295; -.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR GeneID; 61613134; -.
DR KEGG; smd:Smed_0295; -.
DR PATRIC; fig|366394.8.peg.3360; -.
DR eggNOG; COG0366; Bacteria.
DR HOGENOM; CLU_006462_2_3_5; -.
DR OrthoDB; 9805159at2; -.
DR Proteomes; UP000001108; Chromosome.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd11330; AmyAc_OligoGlu; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 2.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR045857; O16G_dom_2.
DR PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR PANTHER; PTHR10357:SF179; NEUTRAL AND BASIC AMINO ACID TRANSPORT PROTEIN RBAT; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
FT DOMAIN 25..417
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 551 AA; 62541 MW; 0714C7F1CCE4A57F CRC64;
MTLSETTSSL LEPDRDWWRG AVIYQIYPRS FQDTNGDGIG DLQGITARLP HIAGLGADAI
WISPFFTSPM KDFGYDVSNY VDVDPIFGAL DDFDALIAEA HRLGLRVMID LVLSHSSDQH
PWFVESRSTR SNAKADWYVW ADSKPDGTPP NNWLSIFGGS AWQWDPTRLQ YYLHNFLISQ
PDLNLHNSEV QDALLSVARF WLERGVDGFR LDTINFYFHD RELRDNPALA PERRNASTAP
AVNPYNYQEH IYDKNRPENL EFLQRFRALM DEFPAIAAVG EVGDSQRGLD IAAEYTSGGD
KVHMCYAFEF LAPDQLTPQR VAEVLRDFQR AAPEGWACWA FSNHDVVRHI SRWAHGVTSR
DAHAKLLASL LMSLRGSVCI YQGEELALAE AELAYEDLKD PYGIQFWPDF KGRDGCRTPM
VWESLPDGGF SSTRPWLPIC KSHVPGAVAV QESDPNSVLH HYRRFLAFRK AHRAFAKGEI
EFVETKGALL GFLRIHGDEK LFCLFNMSDQ PATKELPIKR LEPLDGHGFV FEIMDHEVKL
PAWGAFFARL A
//
