ID   A6XAB1_TUMVJ            Unreviewed;       783 AA.
AC   A6XAB1;
DT   21-AUG-2007, integrated into UniProtKB/TrEMBL.
DT   21-AUG-2007, sequence version 1.
DT   27-MAR-2024, entry version 59.
DE   SubName: Full=Polyprotein {ECO:0000313|EMBL:AAZ94090.1};
DE   Flags: Fragment;
OS   Turnip mosaic virus (strain Japanese) (TuMV).
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
OX   NCBI_TaxID=12230 {ECO:0000313|EMBL:AAZ94090.1};
OH   NCBI_TaxID=126270; Alliaria petiolata (Garlic mustard) (Arabis petiolata).
OH   NCBI_TaxID=3705; Brassica.
OH   NCBI_TaxID=38206; Calanthe.
OH   NCBI_TaxID=3719; Capsella bursa-pastoris (Shepherd's purse) (Thlaspi bursa-pastoris).
OH   NCBI_TaxID=264418; Hesperis matronalis.
OH   NCBI_TaxID=13274; Stellaria media (Common chickweed) (Alsine media).
OH   NCBI_TaxID=74517; Trifolium hybridum (Alsike clover).
RN   [1] {ECO:0000313|EMBL:AAZ94090.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Tu6 {ECO:0000313|EMBL:AAZ94090.1};
RA   Singh A., Jenner C.E., Nettleship S.B., Foster G.D., Walsh J.A.;
RT   "Molecular characterization of Turnip mosaic virus.";
RL   Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; DQ102479; AAZ94090.1; -; Genomic_RNA.
DR   GO; GO:0044423; C:virion component; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR039560; Potyvirid-P3.
DR   InterPro; IPR013648; PP_Potyviridae.
DR   PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR   PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF08440; Poty_PP; 1.
DR   Pfam; PF13608; Potyvirid-P3; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Covalent protein-RNA linkage {ECO:0000256|ARBA:ARBA00022520};
KW   Helicase {ECO:0000256|ARBA:ARBA00022806};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT   DOMAIN          117..269
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          288..447
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AAZ94090.1"
FT   NON_TER         783
FT                   /evidence="ECO:0000313|EMBL:AAZ94090.1"
SQ   SEQUENCE   783 AA;  87845 MW;  C839A46080307D84 CRC64;
     LERIIAFVAL VLMMFDAERS DCVTKILNKL KGLVATVEPT VYHQTLNDIE DDLSERNLFV
     DFELSSDGDM LQQLPAEKTF ASWWSHQLSR GFTIPHYRTE GKFMTFTRAT ATEVASKIAH
     ESDRDILLMG AVGSGKSTGL PYHLSRKGNV LLLEPTRPLA ENVHKQLSQA PFHQNTTLRM
     RGLTAFGSAP ISVMTSGFAL NYFANNRMRI EEFDFVIFDE CHVHDANAMA MRCLLHECDY
     SGKIIKVSAT PPGREVEFST QYPVSISTED TLSFQDFVNA QGSGSNCDVI SKGDNILVYV
     ASYNEVDALS KLLIERDFKV TKVDGRTMKV GNIEITTSGT PNKKHFIVAT NIIENGVTLD
     IDVVADFGTK VLPYLDTDSR MLSTTKTSIN YGERIQRLGR VGRHKPGHAL RIGHTEKGLS
     EVPSCIATEA ALKCFTYGLP VITNNVSTSI LGNVTVKQAR TMSVFEITPF YTSQVVRYDG
     SMHPQVHELL KRFKLRDSEI VLNKLAIPHR GVNAWLTASE YARLGANVED RRDVRIPFMC
     RDIPEKLHLD MWDVIVKFKG DAGFGRLSSA SASKVAYTLQ TDVNSIQRTV TIIDTLIAEE
     RRKQEYFKTV TSNCVSSSNF SLQSITNAIK SRMMKDHTCE NISVLEGAKS QLLEFRNLNA
     DHSFATKTDG ISRHFMSEYG ALEAVHHQNT SDMSKFLKLK GKWNKTLITR DVLVLCGVLG
     GGLWMVIQHL RSKISEPVTH EAKGKRQRQK LKFRNARDNK MGREVYGDDD TIEHFFGDAY
     TKK
//