ID A7HJW7_FERNB Unreviewed; 226 AA.
AC A7HJW7;
DT 11-SEP-2007, integrated into UniProtKB/TrEMBL.
DT 11-SEP-2007, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE SubName: Full=Holliday junction resolvase YqgF {ECO:0000313|EMBL:ABS60200.1};
GN OrderedLocusNames=Fnod_0335 {ECO:0000313|EMBL:ABS60200.1};
OS Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1).
OC Bacteria; Thermotogota; Thermotogae; Thermotogales; Fervidobacteriaceae;
OC Fervidobacterium.
OX NCBI_TaxID=381764 {ECO:0000313|EMBL:ABS60200.1, ECO:0000313|Proteomes:UP000002415};
RN [1] {ECO:0000313|EMBL:ABS60200.1, ECO:0000313|Proteomes:UP000002415}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35602 / DSM 5306 / Rt17-B1
RC {ECO:0000313|Proteomes:UP000002415};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C.,
RA Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.;
RT "Complete sequence of Fervidobacterium nodosum Rt17-B1.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABS60200.1, ECO:0000313|Proteomes:UP000002415}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35602 / DSM 5306 / Rt17-B1
RC {ECO:0000313|Proteomes:UP000002415};
RX PubMed=19307556; DOI=10.1073/pnas.0901260106;
RA Zhaxybayeva O., Swithers K.S., Lapierre P., Fournier G.P., Bickhart D.M.,
RA DeBoy R.T., Nelson K.E., Nesbo C.L., Doolittle W.F., Gogarten J.P.,
RA Noll K.M.;
RT "On the chimeric nature, thermophilic origin, and phylogenetic placement of
RT the Thermotogales.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:5865-5870(2009).
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DR EMBL; CP000771; ABS60200.1; -; Genomic_DNA.
DR RefSeq; WP_011993521.1; NC_009718.1.
DR AlphaFoldDB; A7HJW7; -.
DR STRING; 381764.Fnod_0335; -.
DR KEGG; fno:Fnod_0335; -.
DR eggNOG; COG0816; Bacteria.
DR HOGENOM; CLU_108858_0_0_0; -.
DR OrthoDB; 44843at2; -.
DR Proteomes; UP000002415; Chromosome.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002415};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517}.
FT DOMAIN 1..88
FT /note="YqgF/RNase H-like"
FT /evidence="ECO:0000259|SMART:SM00732"
SQ SEQUENCE 226 AA; 25897 MW; DEE0857A2861784A CRC64;
MSIIAIDYGK SKCGYAIGNV FVSESGTIKT SEIHTKISSF KKIILGIPLS MSGNYSTQTF
EVIKFGIKLL KQGKEVLFID ERLTTQMAKT YQKKDDDRFS AEQLLLDYIN NPQRVKKLEI
TKIKQSQEIK AEFAIVIEVP YDDKFNISSG IAFSEDPYTA YTLFSKGFFV YRVFKDFSKS
LSEIEKKPEC IIINNEIRQI LSNLDLELRD TQINQIPVYS FTVTKE
//
