ID RS4_XANP2 Reviewed; 205 AA.
AC A7IMS4;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 1.
DT 29-MAY-2013, entry version 38.
DE RecName: Full=30S ribosomal protein S4;
GN Name=rpsD; OrderedLocusNames=Xaut_4095;
OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC Xanthobacteraceae; Xanthobacter.
OX NCBI_TaxID=78245;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1158 / Py2;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.,
RA Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J.,
RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Ensigns S.A., Richardson P.;
RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC directly to 16S rRNA where it nucleates assembly of the body of
CC the 30S subunit (By similarity).
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy (By similarity).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5.
CC The interaction surface between S4 and S5 is involved in control
CC of translational fidelity (By similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein S4P family.
CC -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
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DR EMBL; CP000781; ABS69317.1; -; Genomic_DNA.
DR RefSeq; YP_001418974.1; NC_009720.1.
DR ProteinModelPortal; A7IMS4; -.
DR STRING; 78245.Xaut_4095; -.
DR EnsemblBacteria; ABS69317; ABS69317; Xaut_4095.
DR GeneID; 5421396; -.
DR KEGG; xau:Xaut_4095; -.
DR PATRIC; 24050348; VBIXanAut29526_4438.
DR eggNOG; COG0522; -.
DR HOGENOM; HOG000221004; -.
DR KO; K02986; -.
DR OMA; YRCKPGD; -.
DR ProtClustDB; PRK05327; -.
DR BioCyc; XAUT78245:GHS6-4143-MONOMER; -.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 1.10.1050.10; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1; -.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1 205 30S ribosomal protein S4.
FT /FTId=PRO_1000140819.
FT DOMAIN 94 157 S4 RNA-binding.
SQ SEQUENCE 205 AA; 23304 MW; 256C9C8CE8944EB2 CRC64;
MSKRIAAKHK IDRRMGENIW GRSKSPVNRR EYGPGQHGQR RKGKLSDFGV QLRAKQKLKG
YYGSIGEKQF HKVYVEASRL KGDTGANLIG LLERRLDAVV YRAKFVPTIF AARQFVSHGH
VKVNGQRVNI PSYLVKVGDV VEVKEASRQM TLVLEAQQLG ERDVPDYIEL DAGKLAARFA
RIPELNEVPY PVQMEPNLVV EFYSR
//
