ID A7M1Y7_BACO1 Unreviewed; 944 AA.
AC A7M1Y7;
DT 02-OCT-2007, integrated into UniProtKB/TrEMBL.
DT 02-OCT-2007, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=alpha-L-rhamnosidase {ECO:0000256|ARBA:ARBA00012652};
DE EC=3.2.1.40 {ECO:0000256|ARBA:ARBA00012652};
GN ORFNames=BACOVA_04121 {ECO:0000313|EMBL:EDO10672.1};
OS Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 /
OS CCUG 4943 / NCTC 11153).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=411476 {ECO:0000313|EMBL:EDO10672.1, ECO:0000313|Proteomes:UP000005475};
RN [1] {ECO:0000313|EMBL:EDO10672.1, ECO:0000313|Proteomes:UP000005475}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC
RC 11153 {ECO:0000313|Proteomes:UP000005475};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Thiruvilangam P., Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EDO10672.1, ECO:0000313|Proteomes:UP000005475}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC
RC 11153 {ECO:0000313|Proteomes:UP000005475};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Bacteroides ovatus (ATCC 8483).";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal non-reducing alpha-L-rhamnose residues
CC in alpha-L-rhamnosides.; EC=3.2.1.40;
CC Evidence={ECO:0000256|ARBA:ARBA00001445};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDO10672.1}.
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DR EMBL; AAXF02000052; EDO10672.1; -; Genomic_DNA.
DR RefSeq; WP_004300484.1; NZ_DS264582.1.
DR AlphaFoldDB; A7M1Y7; -.
DR CAZy; GH78; Glycoside Hydrolase Family 78.
DR GeneID; 29453976; -.
DR eggNOG; COG3408; Bacteria.
DR HOGENOM; CLU_002926_1_1_10; -.
DR Proteomes; UP000005475; Unassembled WGS sequence.
DR GO; GO:0030596; F:alpha-L-rhamnosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 1.50.10.10; -; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 2.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.60.420.10; Maltose phosphorylase, domain 3; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR016007; Alpha_rhamnosid.
DR InterPro; IPR035396; Bac_rhamnosid6H.
DR InterPro; IPR035398; Bac_rhamnosid_C.
DR InterPro; IPR013737; Bac_rhamnosid_N.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR008902; Rhamnosid_concanavalin.
DR PANTHER; PTHR33307:SF11; ALPHA-L-RHAMNOSIDASE; 1.
DR PANTHER; PTHR33307; ALPHA-RHAMNOSIDASE (EUROFUNG); 1.
DR Pfam; PF05592; Bac_rhamnosid; 1.
DR Pfam; PF17389; Bac_rhamnosid6H; 1.
DR Pfam; PF17390; Bac_rhamnosid_C; 1.
DR Pfam; PF08531; Bac_rhamnosid_N; 1.
DR PIRSF; PIRSF010631; A-rhamnsds; 1.
DR SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..20
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 21..944
FT /note="alpha-L-rhamnosidase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002713014"
FT DOMAIN 201..371
FT /note="Bacterial alpha-L-rhamnosidase N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08531"
FT DOMAIN 398..490
FT /note="Alpha-L-rhamnosidase concanavalin-like"
FT /evidence="ECO:0000259|Pfam:PF05592"
FT DOMAIN 508..856
FT /note="Alpha-L-rhamnosidase six-hairpin glycosidase"
FT /evidence="ECO:0000259|Pfam:PF17389"
FT DOMAIN 859..935
FT /note="Alpha-L-rhamnosidase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17390"
SQ SEQUENCE 944 AA; 106784 MW; 6EBF8AB9505678B8 CRC64;
MKFKKILLSL LICLSCFVQA KNITISRLTC EMQEGLVVVE GSPRLGWVME SPENGTRQSA
YEIDIREAFT GRSVWNSGKV YSSQSQLVST KGADIRPDNS FNYSWRVRVW DETDTPSEWS
SEAKFRAVPE RLSSGQWIGA ITRQNAHLPE GRKFHGGELK KPEVKAAWEA VDTLAKKSIC
LRRTFQVGDA KEGGANRKPG KKIVEATAYV CGLGFYEFSL NGKKVGNSEF APLWSDYDKT
VYYNTYDVTE QLRRGENVVG ILLGNGFYNV QGGRYRKLQI SFGPPTLLFE LVINYEDGTC
TTVHSDNNWK YDFSPVTFNC IYGGEDYDAR REQKGWNQIG FDDSHWRPVV IQEAPKGILR
PQMAAPVKIM ERYDIQKVTK LNADQVASAS VSTKRTVDLS AFVLDMGQNL AGFPEITVRG
KRGQKVTLIV AEALTEEGAC NQRQTGRQHY YEYTLKGEGD ETWHPRFSYY GFRYIQVEGA
VLKGQKNPQK LPVLKNIQSC FVYNSARKVS TFESSNRIFN AAHRLIEKAV RSNMQSVFTD
CPHREKLGWL EQVHLNGPGL LYNYDLTAYA PQIMQNMADA QHSNGAMPTT APEYVIFEGP
GMDAFAESPE WGGSLVIFPF MYYETYGDDS LIKKYYPNMR RYVDYLKTRA DKGILSFGLG
DWYDYGDFRA GFSRNTPVPL VATAHYYMTV MYLVQAAKMV GNDFDIHYYT SLAQDIMVAF
NKCFLHKDTA QYGTGSQCSN ALPLFLQMTQ DADEQGNYRP DADLNEKVFA NLIKDVEAHG
NRLTTGDVGN RYLIQTLARN GEHELIYKMF NHEEAPGYGF QLKFGATTLT EQWDPRQGSS
WNHFMMGQID EWFFNSLVGI RPSTTPKQGY QKFIIAPQPV GDLKYVKASY ETLYGTINVD
WTCENGTFTL NVSVPVNTTA VVYLPGGKEP KEIQSGTYQL VCAK
//
