ID A7YD88_VIBVL Unreviewed; 202 AA.
AC A7YD88;
DT 23-OCT-2007, integrated into UniProtKB/TrEMBL.
DT 23-OCT-2007, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=RpoD {ECO:0000313|EMBL:ABU92466.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:ABU92466.1};
OS Vibrio vulnificus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=672 {ECO:0000313|EMBL:ABU92466.1};
RN [1] {ECO:0000313|EMBL:ABU92466.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=N-87 {ECO:0000313|EMBL:ABU92466.1};
RX PubMed=17616611; DOI=10.1128/AEM.00635-07;
RA Cohen A.L.V., Oliver J.D., DePaola A., Feil E.J., Boyd E.F.;
RT "Emergence of a virulent clade of Vibrio vulnificus and correlation with
RT the presence of a 33-kilobase genomic island.";
RL Appl. Environ. Microbiol. 73:5553-5565(2007).
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DR EMBL; EF642832; ABU92466.1; -; Genomic_DNA.
DR AlphaFoldDB; A7YD88; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF04546; Sigma70_ner; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 4: Predicted;
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023082};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023082}.
FT DOMAIN 182..195
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABU92466.1"
FT NON_TER 202
FT /evidence="ECO:0000313|EMBL:ABU92466.1"
SQ SEQUENCE 202 AA; 23503 MW; B8EFD36EEA9D73CF CRC64;
TQLRNSYQNL QLAVNEHGRD SAQTAQAHEL MLDVFKEFRL TPKQFDHLVN ELRTAMDRVR
TQERLIMKSA VEIAKMPKKS FIALFTGNES NEEWLDQILA SDKPYVEKIK LHEEDIRRSI
AKLRAIEEET SLSVNNIKDI SRRMSIGEAK ARRAKKEMVE ANLRLVISIA KKYTNRGLQF
LDLIQEGNIG LMKAVDKFEY RR
//
